Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1835 ATGCCGGAGCTTCGTAAAGGAGTGAGGCGTGGTCGTGCTGCGTTAAGCCGTAAAAGCTCAGAACCACTGGCCAGAAAATACGTTAAGACTCGGGCTGCAGTCGCCAAGGAAGTTGCGGCGGTAGCAGAAGCAGCGGCGGCGGCGAAGCAAAGGCCGAGGACTAGGTTGGCGGTGAAGAAGTTGAAGCAGGAGAAGCCGTTGATTGTGATATCGGAGTCCAATAGTGTTATAGAAAGGGCTAAAGGAAATAAGGCTAAGGAAGAAGTTGAAGGTGTGATGGCTGACGATAGCGGTGGGTTGAGTGCTAATAAGGGTGTTGGGCAAGAAGATGGAGGGAACCCTGCACCTTTTCCTGAGAAGGTTCAAGTAGGAGGATCACCTCTGTACAAGATAGACAGGAAGCTGGGTAAAGGTGGGTTTGGTCAAGTTTTTGTTGGCCGTCGGGTTACAGGTGGTAATGAGCGTGCGACAGGTGCTGGTGCTACGGAGGTGGCTCTGAAATTTGAACATAGAAACAGTAAAGGATGTAACTATGGCCCTCCTTATGAGTGGCAAGTGTACAACACCCTTGGTGGTAGTCATGGAATACCTAAAGTGCACTATAAAGGAAGGCAAGGAGAATATTACGTAATGGTCATGGACATGCTTGGTCCTAGCTTGTGGGATGTATGGAATTCCTCAAGCCAGTCGATGTCTGCAGAAATGGTTGCATGTATAGCAGTGGAGTCCTTATCAATCCTAGAGAAGATTCACTTGAGAGGTTATGTGCATGGTGATGTAAAACCAGAGAACTTTTTACTTGGTCAACCATCTACACCACAAGAGAAGAAATTGTTTCTCGTTGACCTTGGATTAGCAACAAAGTGGAGAGACACCTCCAGTGGACAGCATGTTGAATATGATCAGCGGCCGGATATGTTTAGAGGCACTGTCCGATATGCTAGTGTTCATGCTCACTTGGGAAGAACTGCTAGTAGAAGGGATGATCTCGAATCTCTTGCTTATACACTCATCTTTCTTCATAAAGGTCGGTTACCATGGCAAGGATATCAGGGTGATAACAAATCATTCCTTGTTTGCAAAAAGAAAATGGGAACATCTCCTGAGATGATGTGCTGCTTCTGCCCTGCTCCTCTAAAGCAATTTCTTGAGATTGTTGTGAACATGAAATTTGATGAAGAACCCAACTATTCCAAGCTAATATCATTGTTTGATGGCTTGATTGGACCAAATCCTGCATTGCGACCTATTAATACTGAAGGTGCTCAGAAGGTTGGTCAAAAGCGGGGTAGAACAAATTTGGATGAAGAAGATGATTCACAGCCTAAAAAGAAGGTTCGTTTAGGGGTTCCTGCTACCCAGTGGATATCAATTTACAATGCAAGACAGCCAATGAAACAAAGGTATCATTACAATGTGGCTGATGCAAGGTTAGCACAGCATGTGGAGAGAGGGATTACAGATGGCCTCCTTATCAGTTGTGTAGCCTCCTGTTCTAATCTTTGGGCCCTTATTATGGATGCTGGAACTGGTTTTACAACTCAAGTTTACAAGTTGTCACCTTTCTTCTTACACAAGGAATGGATCATGGAGCAGTGGGAAAAGAACTTTTACATTACATCTATTGCTGGGGCCAATAATGGAAGTTCTCTTGTGGTGATGTCAAAAGGTACACAGTTTACTCAACAATCATATAAAGTAAGTGATTCTTTCCCCTTCAAATGGATAAACAAGAAGTGGAGAGAAGGTTTTCATGTGACCTCTATGGCTACTGCTGGAAGTCGTTGGGCCGTTGTTATGTCACGAAATTCAGGATTCAGTGATCAGGTGGTTGAACTTGATTTCCTCTATCCAAGTGAGGGCATTCACAGACGTTGGGACAGTGGGTACAGGATAACAGCAACTGCTGCTACATGGGATCAAGCTGCTCTTATATTAAGCATACCCAGACGCAGGCCTGGTGATGAAACTCAGGAAACTTTGCGTACATCTCAATTTCCCAGCACACATGTCAAGGAAAAATGGTCCAAAAACCTGTATCTTGCTTGTTTGTGTTATGGGCGCACGGTATGCTGA 2076 0.448 MPELRKGVRRGRAALSRKSSEPLARKYVKTRAAVAKEVAAVAEAAAAAKQRPRTRLAVKKLKQEKPLIVISESNSVIERAKGNKAKEEVEGVMADDSGGLSANKGVGQEDGGNPAPFPEKVQVGGSPLYKIDRKLGKGGFGQVFVGRRVTGGNERATGAGATEVALKFEHRNSKGCNYGPPYEWQVYNTLGGSHGIPKVHYKGRQGEYYVMVMDMLGPSLWDVWNSSSQSMSAEMVACIAVESLSILEKIHLRGYVHGDVKPENFLLGQPSTPQEKKLFLVDLGLATKWRDTSSGQHVEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDNKSFLVCKKKMGTSPEMMCCFCPAPLKQFLEIVVNMKFDEEPNYSKLISLFDGLIGPNPALRPINTEGAQKVGQKRGRTNLDEEDDSQPKKKVRLGVPATQWISIYNARQPMKQRYHYNVADARLAQHVERGITDGLLISCVASCSNLWALIMDAGTGFTTQVYKLSPFFLHKEWIMEQWEKNFYITSIAGANNGSSLVVMSKGTQFTQQSYKVSDSFPFKWINKKWREGFHVTSMATAGSRWAVVMSRNSGFSDQVVELDFLYPSEGIHRRWDSGYRITATAATWDQAALILSIPRRRPGDETQETLRTSQFPSTHVKEKWSKNLYLACLCYGRTVC 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1835 691 Gene3D Transferase(Phosphotransferase) domain 1 113 449 - -
Dere14g1835 691 MobiDBLite consensus disorder prediction 429 444 - -
Dere14g1835 691 ProSiteProfiles Protein kinase domain profile. 129 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1835 691 PANTHER CASEIN KINASE-RELATED 129 654 - -
Dere14g1835 691 Pfam Protein kinase domain 129 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1835 691 ProSitePatterns Protein kinases ATP-binding region signature. 135 167 IPR017441 GO:0005524
Dere14g1835 691 SUPERFAMILY Protein kinase-like (PK-like) 129 412 IPR011009 -
Dere14g1835 691 SMART serkin_6 129 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1835 691 MobiDBLite consensus disorder prediction 418 444 - -
Dere14g1835 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Dere14g1835 691 MobiDBLite consensus disorder prediction 1 22 - -
Dere14g1835 691 MobiDBLite consensus disorder prediction 95 119 - -
Dere14g1835 691 FunFam casein kinase 1-like protein HD16 102 447 - -
Dere14g1835 691 MobiDBLite consensus disorder prediction 1 16 - -
Dere14g1835 691 CDD STKc_CK1 129 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1835 Dere-ChrDere14 22302503 22314011 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1835 129 286 EF-hand Containing Proteins AT4G36070 29.814 9.51e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Dere14g1835 Pkinase 1.5e-16 CL0016