Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1830 ATGGAGGAGGAGCACCCGAAGAAGAAGGCAGCGGAAGAAGTCCGGTACCGCGGGGTCCGGCGGAGGCCGTCGGGGAAGTACGCGGCGGAGATAAGAGACCCACATAAGCAAGGAGCGAGGCTGTGGCTGGGGACGTTTGAAACAGCAGAAGCAGCAGCAAGAGCTTATGATCGAGCTGCTTACAACTTTAGGGGTCACCTTGCAGTGCTTAATTTTCCCCAGGAGCTTGGTCTTCCTCCTCACGTGCCTTATGCTCCATGGACATCATCATCGTCATCTTCTTCTCCTTCTTCGGTTGCCTCTCGTGGAGGTGGCGGTGACACTGGAAGTTCTTCGTCTGCTGGACTGCAAAAGGAAGTTTTTGAGTTTGAGTGTTTGGATGATAAGGTATTGGAAGAGCTTCTTGAGTTTGAAGAGAAGAACAAAAAGAAAGGAGAATGA 441 0.517 MEEEHPKKKAAEEVRYRGVRRRPSGKYAAEIRDPHKQGARLWLGTFETAEAAARAYDRAAYNFRGHLAVLNFPQELGLPPHVPYAPWTSSSSSSSPSSVASRGGGGDTGSSSSAGLQKEVFEFECLDDKVLEELLEFEEKNKKKGE 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1830 146 PANTHER DNA-BINDING DOMAIN 8 141 IPR044808 GO:0003700|GO:0009873
Dere14g1830 146 FunFam Ethylene-responsive transcription factor 2 14 74 - -
Dere14g1830 146 PRINTS Ethylene responsive element binding protein signature 39 55 IPR001471 GO:0003700|GO:0006355
Dere14g1830 146 PRINTS Ethylene responsive element binding protein signature 16 27 IPR001471 GO:0003700|GO:0006355
Dere14g1830 146 Pfam AP2 domain 15 66 IPR001471 GO:0003700|GO:0006355
Dere14g1830 146 Gene3D AP2/ERF domain 14 75 IPR036955 GO:0003700|GO:0006355
Dere14g1830 146 PIRSF PTI6 2 139 IPR017392 GO:0003700
Dere14g1830 146 ProSiteProfiles AP2/ERF domain profile. 15 73 IPR001471 GO:0003700|GO:0006355
Dere14g1830 146 SMART rav1_2 15 79 IPR001471 GO:0003700|GO:0006355
Dere14g1830 146 MobiDBLite consensus disorder prediction 85 115 - -
Dere14g1830 146 CDD AP2 15 73 IPR001471 GO:0003700|GO:0006355
Dere14g1830 146 MobiDBLite consensus disorder prediction 81 115 - -
Dere14g1830 146 SUPERFAMILY DNA-binding domain 15 75 IPR016177 GO:0003677
Dere14g1830 146 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1830 Dere-ChrDere14 22203927 22204367 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1830 12 142 AP2-EREBP Transcription Factor Family AT3G23230 59.091 4.74e-43 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere14g1830 AP2 1.4e-13 CL0081