Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1829 ATGGAGGAGAAGCACCGGAAGAAGAAGACGGAGGAGAAGGTGACGGAAGAAGTCCGGTACCGGGGGGTCCGACGGCGGCCGTGGGGGAAGTACGCGGCGGAGATAAGAGACCCACATAAGCAAGGGGCGAGGCTGTGGCTGGGGACGTTTGAAACAGCAGAAGCAGCAGCAAGAGCTTATGATCGAGCTGCTTACAACTTTAGGGGTCACCTTGCAGTGCTTAATTTTCCCCAGGAGTTTGGTCTTCCTCCTCACGTGCCTTATGCTCCATGGTCATCATCATCGTCATCTTCTTCTCCTTCTTCGGTTGTTTCTCATGGAGGTGGCGGTGACACCGGAAGTTCTTCGTCTGCTGGACTACAAAATGAAGTTTTTGAGTTTGAGTGTTTGGATGATAAGGTATTGGAAGAGCTTCTTGAGTTTGAAGAGGAGAAGAACAAAAAGAAAGGAGAATGA 456 0.5066 MEEKHRKKKTEEKVTEEVRYRGVRRRPWGKYAAEIRDPHKQGARLWLGTFETAEAAARAYDRAAYNFRGHLAVLNFPQEFGLPPHVPYAPWSSSSSSSSPSSVVSHGGGGDTGSSSSAGLQNEVFEFECLDDKVLEELLEFEEEKNKKKGE 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1829 151 FunFam Ethylene-responsive transcription factor 2 18 78 - -
Dere14g1829 151 MobiDBLite consensus disorder prediction 87 118 - -
Dere14g1829 151 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Dere14g1829 151 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Dere14g1829 151 CDD AP2 19 77 IPR001471 GO:0003700|GO:0006355
Dere14g1829 151 SMART rav1_2 19 83 IPR001471 GO:0003700|GO:0006355
Dere14g1829 151 MobiDBLite consensus disorder prediction 89 118 - -
Dere14g1829 151 SUPERFAMILY DNA-binding domain 19 79 IPR016177 GO:0003677
Dere14g1829 151 PANTHER DNA-BINDING DOMAIN 8 146 IPR044808 GO:0003700|GO:0009873
Dere14g1829 151 Pfam AP2 domain 19 70 IPR001471 GO:0003700|GO:0006355
Dere14g1829 151 Gene3D AP2/ERF domain 18 78 IPR036955 GO:0003700|GO:0006355
Dere14g1829 151 ProSiteProfiles AP2/ERF domain profile. 19 77 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1829 Dere-ChrDere14 22188298 22188753 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1829 16 145 AP2-EREBP Transcription Factor Family AT3G23230 61.069 1.89e-44 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere14g1829 AP2 7.2e-14 CL0081