Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1827 ATGAACTCTTCCCCAATTCACACAGATTCTTCCTCCTTCTTCCACTCCTCCCACTCCGACATCTCGTCGGAATCCTCCTTTGGCTCGCCGGAGCCTCTCTTGTGGAACATCGACCACGGCCACTTCCCCTTCAATGAGGACGACCCCGACGAAATGCTCCTCTTTGGTCTAATTTCAGAGGCAAACAATGGCCAACAATCATTGAAGGTGAAGGAAGAGGAGGTGAGCTCCGTAGAGACCGTCGGCGCGCCGCCACCGCAGGCGAGGAAGGAGAAGTCGTACCGAGGCGTGCGGAGGCGGCCGTGGGGGAAGTTCGCGGCAGAGATAAGGGATTCAACGAGGCATGGGATCAGAGTGTGGCTGGGGACATTTGACAGTGCAGAAGCTGCGGCTCTGGCTTATGATCAAGCTGCTTTTGCCATGAGAGGCTCTACAGCGATTCTGAATTTCCCAGTGGAGAAGGTGAGGGAGTCACTGAAGGGGATGATGATGAACGGTGGTTCTGAAGAAGAAGACGAAGAAGGAGGAGGGGAAGGAGGGTGTTCGCCTGTGGTGGCGTTGAAGAGAAAACACTCCATGAGAAGGAGAATCAGCAACAAGAAGATCAAAGACAGTGATGTTAGGATGATAGAGAATGTGGTGGTGTTGGAAGATCTTGGTGCAGATTACTTAGAACAATTATTGTTGTCCTCTGAGAATCCCAGACCTTCAATTCAAGCTCCATGTTGA 729 0.5213 MNSSPIHTDSSSFFHSSHSDISSESSFGSPEPLLWNIDHGHFPFNEDDPDEMLLFGLISEANNGQQSLKVKEEEVSSVETVGAPPPQARKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFAMRGSTAILNFPVEKVRESLKGMMMNGGSEEEDEEGGGEGGCSPVVALKRKHSMRRRISNKKIKDSDVRMIENVVVLEDLGADYLEQLLLSSENPRPSIQAPC 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1827 242 FunFam Ethylene-responsive transcription factor 2 92 153 - -
Dere14g1827 242 SMART rav1_2 93 157 IPR001471 GO:0003700|GO:0006355
Dere14g1827 242 PANTHER DNA-BINDING DOMAIN 67 229 IPR044808 GO:0003700|GO:0009873
Dere14g1827 242 Gene3D AP2/ERF domain 92 153 IPR036955 GO:0003700|GO:0006355
Dere14g1827 242 MobiDBLite consensus disorder prediction 75 95 - -
Dere14g1827 242 PRINTS Ethylene responsive element binding protein signature 133 153 IPR001471 GO:0003700|GO:0006355
Dere14g1827 242 PRINTS Ethylene responsive element binding protein signature 94 105 IPR001471 GO:0003700|GO:0006355
Dere14g1827 242 ProSiteProfiles AP2/ERF domain profile. 93 151 IPR001471 GO:0003700|GO:0006355
Dere14g1827 242 SUPERFAMILY DNA-binding domain 93 153 IPR016177 GO:0003677
Dere14g1827 242 MobiDBLite consensus disorder prediction 1 28 - -
Dere14g1827 242 CDD AP2 92 152 IPR001471 GO:0003700|GO:0006355
Dere14g1827 242 Pfam AP2 domain 93 143 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1827 Dere-ChrDere14 22148086 22148814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1827 42 233 AP2-EREBP Transcription Factor Family AT3G23240 59.184 4.04e-72 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere14g1827 AP2 8.5e-15 CL0081