Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1820 ATGGTGAGAGCTCCTTGCTGTGAGAAGGTGGGGTTGAAGAAGGGCCTTTGGACTCCTCAAGAAGATCAAATCTTGGTTTCTTATATCCAGAAACATGGCCACGGCAACTGGCGTGCCCTCCCAAAGCATGCAGGTACGTGGTCAGCTATTGCAGCAAAATTGCCGGGACGAACCGACAACGAAATAAAAAATGTGTGGAACACCCACTTGAAGAAGAGACTGCTTCAGAAACCCACAAGCCAATCCCATTCATCAAAACCAAGAACCAAAAGATCTCGTTCAAAATCCAGCACAAGAACTCAGTCATCAGAAGCTTCAAGTTTCAACAATGGTTCTGAGATGGATCATCATAGTGCTAACAATTCTGCATGCACTTCTTCTAGTGATGGTTCATCAGTCACAGTTGGAGAAAGCAAAAGAATGGAGACGAGTGTGATCGGTAAGAATGAAGAAGACACTGAGGAAACAGTGCCTGAGATTGATGAAAGCTTTTGGTCTGAAGCAGCAATGGGGCCTGCAAATTCTTTGACAATCGCTAATGAATTACCAGTCCATGTTCATTATGGTTATAGTTTAAACTTCCATGATGGCATGGATTTCTGGTACGACTTGTTCTTGAGATCTGACGATTCACCAGAGTTGCTTGAGTTCTGA 654 0.4388 MVRAPCCEKVGLKKGLWTPQEDQILVSYIQKHGHGNWRALPKHAGTWSAIAAKLPGRTDNEIKNVWNTHLKKRLLQKPTSQSHSSKPRTKRSRSKSSTRTQSSEASSFNNGSEMDHHSANNSACTSSSDGSSVTVGESKRMETSVIGKNEEDTEETVPEIDESFWSEAAMGPANSLTIANELPVHVHYGYSLNFHDGMDFWYDLFLRSDDSPELLEF 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1820 217 Gene3D - 11 75 - -
Dere14g1820 217 SMART sant 13 72 IPR001005 -
Dere14g1820 217 CDD SANT 17 70 IPR001005 -
Dere14g1820 217 ProSiteProfiles Myb-like domain profile. 9 70 IPR001005 -
Dere14g1820 217 MobiDBLite consensus disorder prediction 96 139 - -
Dere14g1820 217 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 74 IPR017930 -
Dere14g1820 217 MobiDBLite consensus disorder prediction 72 157 - -
Dere14g1820 217 Pfam Myb-like DNA-binding domain 14 70 IPR001005 -
Dere14g1820 217 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 45 - -
Dere14g1820 217 SUPERFAMILY Homeodomain-like 8 78 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1820 Dere-ChrDere14 21995305 21997984 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1820 1 205 MYB Transcription Factor Family AT2G31180 33.704 1.17e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere14g1820 Myb_DNA-binding 6.6e-14 CL0123