Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1816 ATGGAGAGCCAAGACGACGACGTCGTGAAGGTGCTGAGCTTCTTTCTGAGTCCTGTAGGTTGCAGAGCGGTGTGGGCTCTGAGAGTGAAGGGTGTGGATTATGAGTATGTTGAAGAAGACATCTTCAACAAAAGCAGCCTCCTTCTGCAGATGAATCCAGTTCACAAGAAGGTTCCTGTTCTGATTCATCACCACAAACCCATCTCTGAGTCACTCGTCATCGTTGAATACATTGATGAAACTTGGCGCCAATCGCCATTGTTGCCTCAGCACCCTCATCAGAGAGCTCTCGCACGTTTCCGGGCCAAATTTGCTGAAGAAAAGGTTTTATTTGCTGCACATAAGGCTATGTGCTCTAACGGGGATGAACAAAAAAATGCTATAAAATCAATCAAGGAAGCAATGGAGAAGATAGAAGAAGAGATAAAGGGGAAGAAACTCTTTGGAGGGGAAAACATAGGGTACCTTGACATTGCTTTGGGATGGATCTCTCATTGGCTTCCTGTTTGGGAAGAAGTTGGATGCATGCAGATATTAGATCCTTTGAAATTTCCATCCATCACTTCTTGGATGGACACTTTCAGCAATCACCCACTCATCAAGGACACCCTACCTCCTAGGGACAAGATGCTCCCTTACTTCCATCGTCAAAAGAATCAATTTTCTTCTCGTGCTTCTCGTGTTTAA 687 0.4483 MESQDDDVVKVLSFFLSPVGCRAVWALRVKGVDYEYVEEDIFNKSSLLLQMNPVHKKVPVLIHHHKPISESLVIVEYIDETWRQSPLLPQHPHQRALARFRAKFAEEKVLFAAHKAMCSNGDEQKNAIKSIKEAMEKIEEEIKGKKLFGGENIGYLDIALGWISHWLPVWEEVGCMQILDPLKFPSITSWMDTFSNHPLIKDTLPPRDKMLPYFHRQKNQFSSRASRV 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1816 228 SFLD Main.3: Omega- and Tau-like 6 225 IPR045073 -
Dere14g1816 228 FunFam Tau class glutathione S-transferase 2 90 - -
Dere14g1816 228 Coils Coil 121 141 - -
Dere14g1816 228 SUPERFAMILY Thioredoxin-like 9 108 IPR036249 -
Dere14g1816 228 SFLD Main (cytGST) 6 225 - -
Dere14g1816 228 CDD GST_C_Tau 92 214 IPR045074 GO:0004364|GO:0006749
Dere14g1816 228 CDD GST_N_Tau 9 82 - -
Dere14g1816 228 Pfam Glutathione S-transferase, C-terminal domain 110 198 IPR004046 -
Dere14g1816 228 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 211 IPR045073 -
Dere14g1816 228 SUPERFAMILY GST C-terminal domain-like 80 218 IPR036282 -
Dere14g1816 228 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 221 IPR010987 -
Dere14g1816 228 Gene3D Glutaredoxin 2 87 - -
Dere14g1816 228 FunFam Tau class glutathione S-transferase 88 224 - -
Dere14g1816 228 Gene3D - 88 225 - -
Dere14g1816 228 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 7 86 IPR004045 -
Dere14g1816 228 Pfam Glutathione S-transferase, N-terminal domain 8 80 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1816 Dere-ChrDere14 21940217 21942881 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1816 2 226 Glutathione S-transferase Gene Family AT2G29420 40.889 5.02e-64 197