Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1786 ATGATGATTAAGTTGTCTCAGGAGCTCTTCTGTAATAGCTACAAAATCCTTGATGGCCTTGGCACTGATATTCACGTTGTAGGTGGTGGCTGTATTACTCTCCAATATATAAGCAATGTCATCATTCACAACATTCACATCCCACATGGTAGAACTTGTTGTTTTGGAAGTGGCAGAGAGATCATAAGATTGGATTTTGTGGAAGAGAGTGGGATAGGTGATCACAAGGGAAAGCGATGTAGTGTTGGAGTTGGAATGGAGGGTGGAGTTGAGGACAGAATGGGCTCTTTAGAGTTTGTAAAGAGCAGTTGGAGGCATAAGAGATGA 327 0.422 MMIKLSQELFCNSYKILDGLGTDIHVVGGGCITLQYISNVIIHNIHIPHGRTCCFGSGREIIRLDFVEESGIGDHKGKRCSVGVGMEGGVEDRMGSLEFVKSSWRHKR 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1786 108 SUPERFAMILY Pectin lyase-like 2 50 IPR011050 -
Dere14g1786 108 Gene3D - 1 79 IPR012334 -
Dere14g1786 108 PANTHER PECTATE LYASE 18-RELATED 1 49 IPR045032 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1786 Dere-ChrDere14 21313047 21313540 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1786 1 47 Polysaccharide Lyase AT3G54920 59.574 3.37e-16 70.9