Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1774 ATGGATTCTCTACTGCCATTTCAAGACCTCAATCGCTTCCCTAACCCACAAACTACTGTCAGTAACAGCTCTGACTGCATCAATGTCGTTCCCGCTACCCTCTCGGAAATGTGTATCCCAACATTGGTGCCCAAGCTCGAACCTTTGGACGATTTGTTTGAAGCTCAGGAGCACGATGAACCCTACGAAGCCATCTTTTCAGCTCCTAACCCCGAGGCATCATCTGATATCAAGCCTGCTTGTGTTGAAACCCCACCAGGCGTATCGATGGAAGAAGACAACGTGTACTCAGAGTTCAATCGAATTTCTGAGATGTTTAAGGCTGCGTTTCCCGAAGATGCACAGCAGTTTGGAGATGTCACCGTTTTGAACCCAGATTCGCGGGCCATTGTTCCTGTGCCACAGGAGAACAATCAGGTTTCTTCGGAGGTTGTTAGTCGGAAGCGAAGTGGCCGGCGCGTGAAGGAGCTGGTAAGGGTCAACGATATTAGGATTGAGGACGAAAGGCATTGTCGCGACGTAGTCAGAAGGACCAGGATGGTGTACGATTCCTTGCGCATTTTGCCATCGATTGAGGAGAAGAAAAGTAGTACTTTAGCTAAAACTAAGCGGCCTCGAGGTGATGCGAGGGCTGCCTCGTTGTTGAGATACCGCGGATTGTGGCTTAATCGAGATAAGCGGATAGTGGGTGCAATTCCTGGCATTCATGTTGGTGATTTGTTCCTTTATAGGATGGAACTGTTAGTAGTTGGGTTGCACTGCCAAACCCAAGCTGGAATCGATTATCTTCCGGCAAGCATGAGTCCAAACGGGGAGCCAATAGCGACTAGTGTTATCGTTTCGGGTGGATATGAAGATGATATAGATGATGGTGATGTAATAATCTATACAGGACATGGAGGGCAGGACAAGCATTCAAGGCAAGTTGTTGACCAGAAGTTGGAAGGAGGAAACCTTGCATTGGAAAGAAGCATGCGTTATGGGGTTGAAGTGCGGGTTATTCGAGGGATTAAACATGCGGGAAGTGCTTCAACTTCAAACAAGGTTTATGTTTATGATGGTTTGTACAGAATTGTTGCTTGCTGGTTTGAATTGGGTAAGTCTGGTTTTGGAGTTTACAAGTATAAGCTTTTGAGAATTGATGGGCAAGAAAAATTGGGTAGTGCGACTCTTAAACGTGCTCAGCTTCTTAAGGCTGATCCATTGTCTTATAATTCCAAGTGTTGTTTTAGTCTTGATATTTCGCTCAGTAAGGAAAATCTTCCTGTTCGTCTTTTCAATGACATAGATACTGATAATGAGCCTCTTCATTATAAGTATCTTACAAGGACTATTTTTCCTCATTTTGTATTTCATCAAAGCGGGAGTTCTACTGGTTGTGATTGTGTGGGAGGTTGTACCGATGACTGCTTTTGTGCTCTGAAAAATGGAGGTGAATATCCTTATAATCGAAATGGGATTCTCTTTAAAGGAAAGCCTGTAATATTTGAATGTGGCCCATTCTGCCGTTGTCCTCCACATTGTCGGAATCGTGTTACACAAAAGGGGTTAAAAGTTAGATTGGAAGTATTTAGGTCTAGGGAAACAGGTTGGGGAGTTAGGTCCCTAGACTTGATCCATGCTGGTGCTTTTATCTGTGAATATACAGGGGTTGTTGTGACAAAGGAGCAAGCTCAAATTTTGACAATGAATGGTGATGCAATGGTATATCCAAATCGGTTTTCTGATAGGTGGGCAGAATGGGGGGATTTATCTCAGATATATTCTAATCATGTGCGTCCATCATATCCCTCAACTCCTCCTTTAGATTTTGCCTTGGATGTGTCAACAATGAGGAATGTTGCTTGCTATATGAGCCACAGTTCAGTTCCTAATGTGTTTGTTCAGTTTGTTCTCTATGATCACAATAATTTAATGTTTCCTCACCTTATGCTTTTTGCAATGGAGAACATCCCTCCACTGAGGGAGCTCAGCCTTGATTATGGGGTTGCAGACGATTGTACAGGTAAGCTTTCTATATGTAACTGA 2028 0.4374 MDSLLPFQDLNRFPNPQTTVSNSSDCINVVPATLSEMCIPTLVPKLEPLDDLFEAQEHDEPYEAIFSAPNPEASSDIKPACVETPPGVSMEEDNVYSEFNRISEMFKAAFPEDAQQFGDVTVLNPDSRAIVPVPQENNQVSSEVVSRKRSGRRVKELVRVNDIRIEDERHCRDVVRRTRMVYDSLRILPSIEEKKSSTLAKTKRPRGDARAASLLRYRGLWLNRDKRIVGAIPGIHVGDLFLYRMELLVVGLHCQTQAGIDYLPASMSPNGEPIATSVIVSGGYEDDIDDGDVIIYTGHGGQDKHSRQVVDQKLEGGNLALERSMRYGVEVRVIRGIKHAGSASTSNKVYVYDGLYRIVACWFELGKSGFGVYKYKLLRIDGQEKLGSATLKRAQLLKADPLSYNSKCCFSLDISLSKENLPVRLFNDIDTDNEPLHYKYLTRTIFPHFVFHQSGSSTGCDCVGGCTDDCFCALKNGGEYPYNRNGILFKGKPVIFECGPFCRCPPHCRNRVTQKGLKVRLEVFRSRETGWGVRSLDLIHAGAFICEYTGVVVTKEQAQILTMNGDAMVYPNRFSDRWAEWGDLSQIYSNHVRPSYPSTPPLDFALDVSTMRNVACYMSHSSVPNVFVQFVLYDHNNLMFPHLMLFAMENIPPLRELSLDYGVADDCTGKLSICN 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1774 675 SMART set_7 519 668 IPR001214 GO:0005515
Dere14g1774 675 Pfam SET domain 530 662 IPR001214 GO:0005515
Dere14g1774 675 ProSiteProfiles SET domain profile. 519 662 IPR001214 GO:0005515
Dere14g1774 675 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 85 675 IPR025794 GO:0016571
Dere14g1774 675 ProSiteProfiles YDG domain profile. 230 379 IPR003105 -
Dere14g1774 675 Gene3D SET domain 388 675 IPR046341 -
Dere14g1774 675 SUPERFAMILY SET domain 409 663 IPR046341 -
Dere14g1774 675 Pfam Pre-SET motif 415 511 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Dere14g1774 675 Pfam SAD/SRA domain 229 383 IPR003105 -
Dere14g1774 675 SMART preset_2 411 503 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Dere14g1774 675 ProSiteProfiles Pre-SET domain profile. 458 516 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Dere14g1774 675 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 101 663 - -
Dere14g1774 675 SMART G9a_1 225 383 IPR003105 -
Dere14g1774 675 Gene3D - 227 387 IPR036987 -
Dere14g1774 675 SUPERFAMILY PUA domain-like 211 389 IPR015947 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1774 Dere-ChrDere14 21123063 21125090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1774 145 664 Su(var)3-9 homologs AT5G04940 40.490 5.37e-114 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dere14g1774 SAD_SRA 3.5e-49 CL0178