Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1769 ATGTATTGGGGAGTCATGGGAAGCCATATGGGTTGGGGCATAATAGAGGAAGAGGGTTGGAGGAAGGGACCTTGGACTGCTGAAGAAGACAGACTCCTGATTGAGTATGTCAGGATTCATGGTGAAGGAAGATGGAACTCTGTTTCAAGGCTAGCTGGATTGAAAAGAAATGGCAAGAGCTGCAGATTGAGGTGGGTCAATTATCTGAGACCAGACCTCAAGAGGGGTCAGATAACTCCTCAAGAAGAGAGCATAATTCTTGAGCTGCATGCTAGGTGGGGAAACAGGTGGTCTACAATTGCAAGAAGCTTGCCTGGTAGAACTGACAATGAGATAAAGAATTACTGGAGGACTCATTTCAAGAAGAAGGCTAAAAGTCCCACTGATGCTGCAGAAAAGGCCAAAAATCGCCTCTTGAGGAGGAAGCAGTTTCAGTTTCATCAACAGCAGCAACAGCAGCAGTTTCTGCAGCAACAGCAACAACAACAACTGCATCAACAGCAGCAATTACAGATCAACTTGGACATGAAAGGGATCATGGCTTTGCTTGAAGACAGCAATAATGACTACAGAGGGCCTTCCACTCTATGCTCAGTGACAAACATCTATCCAAACACCTCAGATGAGCAAGGCTGCTTCTACTCTATGCTCCATAACAGTAATGCCTCATCAGCTCCCGAGGCCTCAAATGAAGAGCTTCTGTGGGATAGCCTGTGGAACTTAGAAGATGTTCATGGAAATTTCAGTGCAGCTAGTACAACAAGCAAAGCTAGTCTGCACAATCTAGTTGCTCCCTTCTGTTAA 804 0.4552 MYWGVMGSHMGWGIIEEEGWRKGPWTAEEDRLLIEYVRIHGEGRWNSVSRLAGLKRNGKSCRLRWVNYLRPDLKRGQITPQEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKSPTDAAEKAKNRLLRRKQFQFHQQQQQQQFLQQQQQQQLHQQQQLQINLDMKGIMALLEDSNNDYRGPSTLCSVTNIYPNTSDEQGCFYSMLHNSNASSAPEASNEELLWDSLWNLEDVHGNFSAASTTSKASLHNLVAPFC 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1769 267 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Dere14g1769 267 SMART sant 21 71 IPR001005 -
Dere14g1769 267 SMART sant 74 122 IPR001005 -
Dere14g1769 267 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 124 IPR017930 -
Dere14g1769 267 CDD SANT 24 69 IPR001005 -
Dere14g1769 267 Gene3D - 79 123 - -
Dere14g1769 267 FunFam MYB-related transcription factor 79 123 - -
Dere14g1769 267 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 17 198 IPR044676 GO:0003700|GO:0006355|GO:0043565
Dere14g1769 267 FunFam Myb transcription factor 22 74 - -
Dere14g1769 267 Pfam Myb-like DNA-binding domain 75 119 IPR001005 -
Dere14g1769 267 Pfam Myb-like DNA-binding domain 22 69 IPR001005 -
Dere14g1769 267 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 69 IPR017930 -
Dere14g1769 267 Gene3D - 22 74 - -
Dere14g1769 267 CDD SANT 79 120 IPR001005 -
Dere14g1769 267 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Dere14g1769 267 SUPERFAMILY Homeodomain-like 19 116 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1769 Dere-ChrDere14 21034844 21036264 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1769 17 267 MYB Transcription Factor Family AT4G13480 55.472 1.18e-88 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dere14g1769 Myb_DNA-binding 3.2e-16 CL0123