Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1758 ATGATAGCAATTCTGGCTAATCCTTGGTGGACCGGTCAGGTGGGGTTGCCGGGGGTCGACCCGACGGCCAATTCACCGGCCTTGAACAAACGGCACAACACCGAGCTCTCTATCAACGAGAGCACCGGGAAAAATAGTAGCGGTGGTGGGGACAACAACAGAGACGACGACGATGATAGAGACGAACCCAGAGAAGGTGCAGTCGAGGTCGGAACACGCAGACCTAGAGGCCGACCTCCGGGGTCGAAGAACAAGCCCAAGCCACCCATCTTCGTGACCCGGGACAGCCCCAACGCGCTGCGAAGCCACGTGATGGAGGTCGCCAGCGGAGCCGATGTTGCTGAAAGCGTAGCTCAGTTCGCCAGACGGCGGCAGCGCGGGGTTTGTGTGCTGAGCGGGAGTGGCTCCGTCGCCAACGTCACTCTTCGCCAACCTGCTGCACCAGGAGCCTTGGTGGCGCTCCACGGACGGTTCGAGATTCTATCCCTAACCGGTGCATTTTTGCCCGGACCAGCCCCACCTGGATCCACGGGGATGACGGTGTACCTCGCCGGAGGGCAGGGGCAGGTCGTCGGAGGAAGCGTGGTGGGGTCGCTAGTGGCGGCAGGACCAGTGATGGTGATTGCTGCGACTTTTGCTAATGCAACTTATGAGAGACTACCGCTTGATGATGAAGACGAGGGAGGAAGCGGCGGTGTGGCGCAAGGAGGCGGCGGTGGAGGGTCGTCGCCGCCGGCGCCGGGGATCGGAAGCAGTGGGGGACACTTGCAGGGTGGGATTCCAGATCCTTCGTCTCTTCCTTTGTATAATCTGCCGCCAAATCTGCTTCCTAACGGAGGACAGGTGGGTCATCATGAAGCTCTTGCTTGGGCAGCTCATGGGAGGCCACCATACTAG 897 0.6076 MIAILANPWWTGQVGLPGVDPTANSPALNKRHNTELSINESTGKNSSGGGDNNRDDDDDRDEPREGAVEVGTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVASGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGALVALHGRFEILSLTGAFLPGPAPPGSTGMTVYLAGGQGQVVGGSVVGSLVAAGPVMVIAATFANATYERLPLDDEDEGGSGGVAQGGGGGGSSPPAPGIGSSGGHLQGGIPDPSSLPLYNLPPNLLPNGGQVGHHEALAWAAHGRPPY 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1758 298 MobiDBLite consensus disorder prediction 26 49 - -
Dere14g1758 298 CDD DUF296 101 184 IPR005175 -
Dere14g1758 298 Gene3D - 100 228 - -
Dere14g1758 298 FunFam AT-hook motif nuclear-localized protein 100 227 - -
Dere14g1758 298 MobiDBLite consensus disorder prediction 50 72 - -
Dere14g1758 298 ProSiteProfiles PPC domain profile profile. 97 235 IPR005175 -
Dere14g1758 298 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 43 293 IPR014476 GO:0003680
Dere14g1758 298 MobiDBLite consensus disorder prediction 221 265 - -
Dere14g1758 298 SUPERFAMILY AF0104/ALDC/Ptd012-like 97 225 - -
Dere14g1758 298 PIRSF ESCAROLA 18 298 IPR014476 GO:0003680
Dere14g1758 298 MobiDBLite consensus disorder prediction 11 97 - -
Dere14g1758 298 Pfam Plants and Prokaryotes Conserved (PCC) domain 101 213 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1758 Dere-ChrDere14 20876033 20877406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1758 5 298 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 62.416 3.48e-101 296