Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1755 ATGGAAGATCACAGTACTGGTCATGATCAGCAAGAAGAAGAGGTAGAAGATGATGCTAGAGGTTCGACCAAACGCTCTTATTATGGATGCAAATTCTGCAAGCGAGGCTTCACGAATGCGCAGGCATTAGGAGGGCACATGAACATTCACAGGAAAGACAGATCAGTCATGAAGAAGACCAAGCAAGAAGTTAAAGAAAATTCTTCGATAAATGCTCCAATCAAAGTGTCCAATGATGAATCCATCATGAAGCCCTCTCCTTTTCTCTCAGAAATCTCAGTTCAACTTCAACCCACAAGGTATTACAGTTCCACTTTCGATGCTATGAAGAAGAAGAACTTATATAACCCCAGAAACCCATCTTCATACGCCTTTCAAAATGAGTTTCTTAACCCAAGGTCTCAGCTCTTGAATGTAAACCAGGAGTTTCTGAGTTCCAACTTGAGTCTGCAAATCGGTCCAACTCTTGTGGATGATAATGGTGATAGGAGGAGAGTGACTCAGGAAGATGGCGAAGTGGACTTAGAGCTCCGACTTGGTCATGTTCCATACTGA 555 0.427 MEDHSTGHDQQEEEVEDDARGSTKRSYYGCKFCKRGFTNAQALGGHMNIHRKDRSVMKKTKQEVKENSSINAPIKVSNDESIMKPSPFLSEISVQLQPTRYYSSTFDAMKKKNLYNPRNPSSYAFQNEFLNPRSQLLNVNQEFLSSNLSLQIGPTLVDDNGDRRRVTQEDGEVDLELRLGHVPY 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1755 184 ProSitePatterns Zinc finger C2H2 type domain signature. 30 50 IPR013087 -
Dere14g1755 184 ProSiteProfiles Zinc finger C2H2 type domain profile. 28 55 IPR013087 -
Dere14g1755 184 MobiDBLite consensus disorder prediction 1 21 - -
Dere14g1755 184 Gene3D Classic Zinc Finger 4 83 - -
Dere14g1755 184 PANTHER OS07G0101800 PROTEIN 11 181 - -
Dere14g1755 184 SUPERFAMILY beta-beta-alpha zinc fingers 24 56 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1755 Dere-ChrDere14 20816602 20817156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1755 21 77 C2H2 Transcription Factor Family AT3G53820 54.386 1.74e-13 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dere14g1755 None None None