Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1731 ATGGCAAGTCTGAACCTGAAGGAGACCGAGCTGTGTCTGGGCTTGCCCGGGGGCGGCGGCGGTGGTGAGGTGGAGACTCCGAAGGCCGCAGGGAACAAGAGAGCCTTCTCTGCAACTGTTGATCTCAAGCTTAACTTCGTTGATTCCAAGGAAGATCTGATGAACGATCAGAATCTGCAGCAGAAGAATGCCTCCAAGGAGACCAAGAACCTCCTCAAGGACCCAGCTAAGCCTTCTGCTAAGGCACAAGTGGTGGGTTGGCCACCAGTGAGGTCATACAGGAAGAACGTTATGGCACAGAAGGTGAACAGCGAAGAAGGTAACACTGATCAGAAGACAACACCTTCTTCTTCTTCTGGAGGAGCATTTGTGAAGGTTTCCATGGATGGCGCTCCCTACCTTCGCAAGGTGGACTTAAAGATGTACAAAAGCTACCAAGAACTCTCTGATGCCTTAGCCAAAATGTTCAGCTCCTTCACCATGGGAGAGTATGGAGCCCAAGGAATGATAGACTTCATGAACGAGAGCAAGTTGATGGATCTTCTGAACAGCTCTGAGTATGTGCCAACCTATGAAGATAAGGATGGTGACTGGATGCTCGTGGGTGATGTCCCATGGCAGATGTTCGTTGAGTCATGCAAGCGTCTGCGAATAATGAAAGGATCAGAAGCTATTGGACTCGCGCCAAGAGCCATGGAAAAATGCAAAAGCAGAAGCTGA 720 0.5 MASLNLKETELCLGLPGGGGGGEVETPKAAGNKRAFSATVDLKLNFVDSKEDLMNDQNLQQKNASKETKNLLKDPAKPSAKAQVVGWPPVRSYRKNVMAQKVNSEEGNTDQKTTPSSSSGGAFVKVSMDGAPYLRKVDLKMYKSYQELSDALAKMFSSFTMGEYGAQGMIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWQMFVESCKRLRIMKGSEAIGLAPRAMEKCKSRS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1731 239 FunFam Auxin-responsive protein 116 231 - -
Dere14g1731 239 MobiDBLite consensus disorder prediction 54 83 - -
Dere14g1731 239 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 4 226 IPR003311 GO:0005634|GO:0006355
Dere14g1731 239 SUPERFAMILY CAD & PB1 domains 113 220 - -
Dere14g1731 239 Pfam AUX/IAA family 8 230 IPR033389 -
Dere14g1731 239 Gene3D - 116 233 - -
Dere14g1731 239 ProSiteProfiles PB1 domain profile. 121 221 IPR000270 GO:0005515
Dere14g1731 239 MobiDBLite consensus disorder prediction 99 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1731 Dere-ChrDere14 19909466 19913065 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1731 106 229 B3 DNA Binding Superfamily AT4G23980 32.258 4.17e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Dere14g1731 AUX_IAA 3.8e-85 CL0072