LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere14g1723	ATGAGAAGTTGCAGACCCCATCAAGTTTCCTCTGTATTGCTCTTCTTCTTCTTCTTCCTCCTCCTTCATCTTCTTACTCCGTCACAAGTCCAGGCACAGAACCTCATACAACCAAACACCACAGGCTACAAGTGCCCCGCAAACCAGACCAACAGCACCACCTATCCATGCCAAACCTACGCTTTCTACCGAGCCTCGGCTCCAGATTTCCTCGACCTCGGCTCCATCGGTGACCTCTTCTCTCTTAGCCGCCTCATGATTGCGAACCCAAGCAATATTTCCTCTCCTTCTTCCTCCTTAGTCCCCAACCAACCCCTCTTCATTCCATTGTCTTGCTCTTGCAACTTCATCAACTCCACCTTCGGTGCCATCTCCTATGCCAATCTCTCCTACACCATCAAGAAGGGCGACACCTTCTACCTCGTCTCGACTAACAAATTCCAGAATCTCACTACCTACCAGTCCGTGGAAGTCGTGAACCCTACTCTCGTCCCCACGAATTTGACGATCGGGGTTGAACCTGTGTTCCCTGTGTTCTGTAAGTGCCCTAACAGGACGCAACTGCAAAACGGAGAGAAAATCCTGATTTCCTATGTCGTTCAACCATCTGATAACATATCGTCGATTGCTTCCATGTTTGGATCCCAATCGCAGGCTATAATCGACATCAACGGCAGAAATTTCCGAGAATTTGATACTATTTTCGTTCCGGTTTCGCGACTGCCGGTGTTGTCGCAGCCTACTACGGCTTCTGCTCCTGCTCCTTCTCCTTCTGCTTCTCCTGTAAACTCTGATGATAGAGAAGGTACTGTAAGAGGACTGGCGATTGGGTTAGGGATTGTTGGGTTGCTGTTGATTTTGGTTTCTGGGTTTTGGGTTTACAGAGAGGTTCTGTTCAAGGATAGGTTGGGGGTGGTGGGAGATGAGGAGAAACAGAAGCAGAACTTCTATGGAGGAAGCAAAGAGACCAAAGGGTCGAAGGAAATGGAAGCGAAATTGATGGCGAATGTGTCGGATTGCTTAGACAAGTATAGGGTTTTTGAGTTTGAACAACTGAGAGAAGCCACTGATGGGTTTGATGAAGCTTGCTTGATTCTTGGGTCTGTGTACAAAGGGACCATTGATGGAGAGGTATATGCCATAAAGAAGATGAAGTGGAATGCCTACGAGGAGCTCAAGATCTTACAGAAGGTGAACCATGGGAATCTGGTGAAGCTGGAGGGATTCTGCATCGACGCAGATGAAGCAAACTGCTATTTAGTCTACGAATACGTCGAGAATGGCTCCCTCTATTCATGGCTGCACGAGGAAAAAACCGAGCGTCTGAACTGGAAGACGCGCCTACGCGTCGCCATCGACGTCGCCAACGGCCTCCAGTACATCCACGAGCACACAAGGCCAAAGGTGGTGCACAAAGACATCAAGAGCAGCAACATCCTCCTGGACACCAATATGAGAGCCAAAATCGCCAACTTTGGCCTCGCAAAGTCAGGCATGAACGCCATCACCATGCACATTGTGGGAACTCAAGGGTACATCGCCCCAGAGTATCTCGCAGACGGCGTTGTCTCGACGAAGATGGACGTCTTCTCTTTTGGGGTGGTCTTGCTTGAGCTGATCACAGGTAAGGAAGCCATTGATGAGGACGGGAATCTCCTGTGGGCGAGTGCTGTGAAAAGGTTTGAGGTGGAGAGTGAGGAGAAGGGTAGGAGACTGAGGGAATGGTTGGATGGTGCTCTTCTGAGGGACACGTGCTCGTTGGAGAGTCTCATGGGTGTTCTTAGTATTGCCCTTGCTTGCTTGCATAGGGATCCTACAAAGAGGCCTAGTATGGTGGATATTGTGTATGCCCTGTGTAAAAGTGAAGACACGGGGTTTGATACCTCTGATGATGGGATAGGGTCCCCATTGGTAATGGCCAGGTGA	1926	0.4953	MRSCRPHQVSSVLLFFFFFLLLHLLTPSQVQAQNLIQPNTTGYKCPANQTNSTTYPCQTYAFYRASAPDFLDLGSIGDLFSLSRLMIANPSNISSPSSSLVPNQPLFIPLSCSCNFINSTFGAISYANLSYTIKKGDTFYLVSTNKFQNLTTYQSVEVVNPTLVPTNLTIGVEPVFPVFCKCPNRTQLQNGEKILISYVVQPSDNISSIASMFGSQSQAIIDINGRNFREFDTIFVPVSRLPVLSQPTTASAPAPSPSASPVNSDDREGTVRGLAIGLGIVGLLLILVSGFWVYREVLFKDRLGVVGDEEKQKQNFYGGSKETKGSKEMEAKLMANVSDCLDKYRVFEFEQLREATDGFDEACLILGSVYKGTIDGEVYAIKKMKWNAYEELKILQKVNHGNLVKLEGFCIDADEANCYLVYEYVENGSLYSWLHEEKTERLNWKTRLRVAIDVANGLQYIHEHTRPKVVHKDIKSSNILLDTNMRAKIANFGLAKSGMNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELITGKEAIDEDGNLLWASAVKRFEVESEEKGRRLREWLDGALLRDTCSLESLMGVLSIALACLHRDPTKRPSMVDIVYALCKSEDTGFDTSDDGIGSPLVMAR	641

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere14g1723	641	Gene3D	Phosphorylase Kinase; domain 1	329	424	-	-
	Dere14g1723	641	Pfam	Protein kinase domain	367	615	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dere14g1723	641	Gene3D	Transferase(Phosphotransferase) domain 1	425	631	-	-
	Dere14g1723	641	Pfam	LysM domain	198	230	IPR018392	-
	Dere14g1723	641	PANTHER	LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED	15	620	-	-
	Dere14g1723	641	FunFam	PTI1-like tyrosine-protein kinase 3	425	629	-	-
	Dere14g1723	641	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	469	481	IPR008271	GO:0004672\|GO:0006468
	Dere14g1723	641	SUPERFAMILY	Protein kinase-like (PK-like)	344	618	IPR011009	-
	Dere14g1723	641	SMART	serkin_6	359	620	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dere14g1723	641	MobiDBLite	consensus disorder prediction	246	265	-	-
	Dere14g1723	641	ProSiteProfiles	Protein kinase domain profile.	349	626	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dere14g1723	641	MobiDBLite	consensus disorder prediction	246	266	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere14g1723	Dere-ChrDere14	19765918	19769918	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere14g1723	36	620	Receptor kinase-like Gene Family	AT2G23770	34.110	2.01e-87	283

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LysM	Dere14g1723		Pkinase	1e-41	CL0016