Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1717 ATGAAGGAAGCAGATGAAGTCGAAGTAGTACGACGGGGCGTGCATGAGTGTAGTTGTCGTTGCATGTGTTTGACGCCTCTGCTATTGTCGTTTTGTGACGACGCGTGGCATGGGTTTGGCCGTCGAACTCTAACAACGCAATCGTCACACGTTTTGGGGAAGATCCTACGAAGTTGGGGCAAGATCAAAGCAGCTACCCCAGAAAGCAACAAAAACCAAATTCAAATAAATGAACAAACAAACGAAAATCGCTATATAAACAGAATTCCCAACGCACACAGCCTTTGTCCCGTGACACTCTGTGGGTTGCTCGCTCCTCTTCCCCATCTCCTGCCGTCAACCCACTTAGCCATGGAACCAGGCGTACCGCCGCAGCCGTCTCCGCCGGCATCGCCGTCTTCCGCCACCACCATTCTAGGGAAGTACCAATTGACCCGTTTACTCGGCCGCGGTAGCTTCGCTAAGGTGTACCAAGCACGATCCTTGATCGATGGAACCACCGTCGCTGTGAAGATCATCGACAAGGCGAAAACCGACGCCGCCATGGAACCTCGAATCGTCCGCGAGGTGGACGCCATGCGCCGCCTTCACGACCATCCGAACATCCTCAAAATCCACGAGGTTATGGCCTCGAAGACCAAGATCTACCTCATCGTGGAGCTCGCCTCTGGCGGCGAGCTCTTCTCGAGGATCTCCCGCAAGGGCCGGATGACGGAGCCGGTGGCGCGACGGTACTTCCAGCAATTGGTCTCCGCGCTCTGTTTCTGCCACCAAAACGGCGTCGCGCACCGCGATGTGAAGCCTCAGAACCTGCTCTTAGACGAGAACGGGAATCTGAAGGTCTCGGACTTCGGACTCTCTGCTTTGCCCGAACAGCTGAAAAACGGGTTGCTCCACACGGCTTGCGGCACGCCGGCTTACACAGCACCAGAAATTCTCTGCCGGCGCGGCTACGACGGTTCGAAGGCCGACGCTTGGTCGTGCGGGCTCATACTATATGTGCTGCTCGCCGGCTACCTCCCGTTCTCCGACGCAAATATCCCGGAGATGTGCAAGAGAATCAGCCGGCGCGATTATAATTTCCCGGACTGGATTTCCAAGTCGGCGCGCTTCGTGATCCATCGACTACTTGACCCGAACCCGAAAACTCGGATGAGCCTAGAATCTCTATACCAAAACTCGTGGTTCAAGAAATCGCTGAAGACCCGACCCGAAGAGAGCGTATTCGAGTCAGGTCCTAATGCGAAATCGTACCACAAACCCGAAATCATGGGTTCGGGCGTGAACGCCTTTGACCTAATATCCATGTCCTCGGGTTTGGACCTGAGGGGGTTGTTCGAAACGACGTCGGATAACAGGAGAGAGAAGAGGTTCACATCGAATGCTTCCATAGGAGTAGTAGAGGAGAAAGTGAAGGAAATAGGAGGAGTTTTAGGGTTCAAAGTGGAAATAGGGAAGAATGGAGCTATCGGGTTAGGTAAAGGGAAGGTGGTTCTTGTGGTTGAAGTGTTTGAGATAGTGCCTGAGTTGGTGTTTGTGGCAGTGAAAGTCATGGATGGTGGATTTGAGTTTGAAGAGCTTCACTGGGGTGACTGGAAAGCTGGGCTTCAAGATCTTGTTGTTTCATGGCATAACGAAGCACTGTGA 1647 0.5337 MKEADEVEVVRRGVHECSCRCMCLTPLLLSFCDDAWHGFGRRTLTTQSSHVLGKILRSWGKIKAATPESNKNQIQINEQTNENRYINRIPNAHSLCPVTLCGLLAPLPHLLPSTHLAMEPGVPPQPSPPASPSSATTILGKYQLTRLLGRGSFAKVYQARSLIDGTTVAVKIIDKAKTDAAMEPRIVREVDAMRRLHDHPNILKIHEVMASKTKIYLIVELASGGELFSRISRKGRMTEPVARRYFQQLVSALCFCHQNGVAHRDVKPQNLLLDENGNLKVSDFGLSALPEQLKNGLLHTACGTPAYTAPEILCRRGYDGSKADAWSCGLILYVLLAGYLPFSDANIPEMCKRISRRDYNFPDWISKSARFVIHRLLDPNPKTRMSLESLYQNSWFKKSLKTRPEESVFESGPNAKSYHKPEIMGSGVNAFDLISMSSGLDLRGLFETTSDNRREKRFTSNASIGVVEEKVKEIGGVLGFKVEIGKNGAIGLGKGKVVLVVEVFEIVPELVFVAVKVMDGGFEFEELHWGDWKAGLQDLVVSWHNEAL 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1717 548 ProSiteProfiles Protein kinase domain profile. 142 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1717 548 Gene3D Transferase(Phosphotransferase) domain 1 132 428 - -
Dere14g1717 548 Pfam NAF domain 428 483 IPR004041 GO:0007165
Dere14g1717 548 SMART serkin_6 142 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1717 548 FunFam Non-specific serine/threonine protein kinase 424 541 - -
Dere14g1717 548 FunFam Non-specific serine/threonine protein kinase 135 226 - -
Dere14g1717 548 SUPERFAMILY Protein kinase-like (PK-like) 138 407 IPR011009 -
Dere14g1717 548 ProSiteProfiles NAF domain profile. 423 447 IPR018451 GO:0007165
Dere14g1717 548 Pfam Protein kinase domain 142 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1717 548 CDD CIPK_C 429 537 - -
Dere14g1717 548 ProSitePatterns Protein kinases ATP-binding region signature. 148 171 IPR017441 GO:0005524
Dere14g1717 548 Gene3D Kinase associated domain 1, KA1 429 541 - -
Dere14g1717 548 FunFam Non-specific serine/threonine protein kinase 133 421 - -
Dere14g1717 548 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 136 510 - -
Dere14g1717 548 ProSitePatterns Serine/Threonine protein kinases active-site signature. 261 273 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1717 Dere-ChrDere14 19534602 19541593 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1717 124 548 Miscellaneous Gene Families AT3G23000 58.851 1.18e-169 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Dere14g1717 Pkinase 1e-68 CL0016