Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1716 ATGACAAATCTTTACAAATCTTCACAAAAATGGATGCCTCTTGATGCTATTTTGAAAAGGGAATGGAATGGGTTTTTAATCAGCCAACCAAACGCAGCAAAGCAAAGGAATAAGACCCCCATTCCCATTCCATTGAGCTACATTCTTCAAACCAAACGTCACCTATCTTCCACAGTAAATCGCTATATAAACAGAATTCCCACCGCACACAGCCTTCGTCCCGTGACACTGTGGGTTGCTCGCTCCTCTTTCTCTGCTCCTTCCGTCAACCCACTTAGCTATGGAGCCAGGCGTCCCGCCGCCGCCGGCGTCGCCGTCCCCTCCGCCATCTCCGTCACCGGCATCGCCGTCCCCTCCGCCGTCGCCGTCCCCGGCATCGCCGTCCCCTCCGCTATCTCCGTTGACGGCATCGCCACCGCCTCCGGCAGCATCCTCGGGAAGTACCAATTAACCCGTTTACTGGGCCGCGGTAGCTTCGCTAAGGTGAACCAAGCGCGATCCTTGTCCATGGAACCTCGAATAGTCCGCGATGTGGACGCCATGCGCCGCCTTCACGACCACCCGAACATCCTCAAAATCCACGAGGTTATGGCCTCGAAGACCAAGATTTACCTCATCGTGGAGTTCGCCACTGGCGGCGAGCTCTTCTCGAGGATCTCCCGCAAGTGCCGGTTGACGGAGCCGGCGGCGCGACGGTACTTCCAGCAATTGGTCTCCGCCCTCTGTTTCTGCCACCAAAACGGCGTCGCACACCGCGATGCTAAGCCTCAAAACCTTCTCTTAGGCGAGAACGGGAATCTGAAGGTCTCGGACTCAGGACTCTCTGCTTTGCCGGAACAGCTGAAAAACGGGTGA 855 0.5626 MTNLYKSSQKWMPLDAILKREWNGFLISQPNAAKQRNKTPIPIPLSYILQTKRHLSSTVNRYINRIPTAHSLRPVTLWVARSSFSAPSVNPLSYGARRPAAAGVAVPSAISVTGIAVPSAVAVPGIAVPSAISVDGIATASGSILGKYQLTRLLGRGSFAKVNQARSLSMEPRIVRDVDAMRRLHDHPNILKIHEVMASKTKIYLIVEFATGGELFSRISRKCRLTEPAARRYFQQLVSALCFCHQNGVAHRDAKPQNLLLGENGNLKVSDSGLSALPEQLKNG 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1716 284 SMART serkin_6 148 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1716 284 ProSiteProfiles Protein kinase domain profile. 148 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1716 284 Pfam Protein kinase domain 164 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1716 284 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 144 278 - -
Dere14g1716 284 SUPERFAMILY Protein kinase-like (PK-like) 144 277 IPR011009 -
Dere14g1716 284 Gene3D Transferase(Phosphotransferase) domain 1 139 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1716 Dere-ChrDere14 19501916 19502857 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1716 144 284 Miscellaneous Gene Families AT3G23000 64.375 1.53e-65 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Dere14g1716 Pkinase 9.9e-29 CL0016