Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1705 ATGGCAAAAACCATTGTTAATTTGGAGCTTAGTGATTCAAATTTAAAACTCCTTGGGGAAGAAGGAGCTATACCTCCTTTGCTTGAAGTGTTGTCTGGCAGTATTGAATCAAAAGAACAATCATTATCCGCCCTGGTTAAACTATCAAGTATCCATGCCAGAAAAGGGATTATAGCTGCCTCTACAGGAGTTCCTCTTATTCTAGAACTAATGTTCTCTCCTCGAAAGCAAACACTCATTACCATAAAATGCTCTGAAATCCTGGAGAAGCTTTCTGTTGATGATGGTGGAATTGATTTCTTTGTTGATGGAGAAGGTAAACAACTTGAGTTAGATTCCATTATCACCAACTTGCTTGCTCTTCAACAGAGTCCCAATTTAGCTCACAATATTCGTAGGCCTGCATTGCATGCACTTCTCGGGATTTGCAAGTTTGAGACTGGTTTAGTCAAGAAGGCAGTCCTGGCTGCCAATGGTGTATCTCTAATCCTTCCCTTTCTTGATGACCCAGATTTAGAAGTGAGAGAGACTTCCATAAACCTGCTCTTTCTTTTCTCCCAACATGAGCCAGATGGAGTAGTTGAATACCTTTTTAGACCAAGAAGGTTGGGGGCTTTAGCCAGGTTTCTTGAGACTGATGGTAATGATGTGCAGATGGCTGCTGCAGGTTTAATAGCAAACCTACCAAAATCTGAAAGAGAGCTCACTATGAATCTGATTAAGTTGGGTGGACTTGATGCAATCATATGCATTTACACACTGGAACAATGGAAGCAAAAGAAAATGCTCTTAGTGCACTCTTCAGCAAAGGCTAGAGCAGCAGCCTTAATTGGCAATCTTTCTATGAGCACTCCCAAACTCATAGTTACTGCCAAATCAAATGGTTGTTGGTGTTTTAGATCATCACGAGTTTTTTTATGTCCAGCACATGATAGTATATGTAGTGTGAGTTACACATTTTGTCTCTTGGAAGCACAAGCTTCGCCTGGTTTGGTGAAGCTTTTACATGGGGAGGTTGATGTAACTGCTTATGAAGCAATACAGACACTTTCAACTTCAGTTGTGGCAGAGGCTCTAGGACTCTTAGAGAAGGTGTTTTTATCAAAGGAAATGGTGGAACACAATGGCACAACTGCTAGATTGCGTCTTGTTGGCATAACAAGAATGAATATATATGGTGAAGGTGTCCTCAAGAAAAAAGCTGCTAAGGTATTATCATTGCTTGAACGTTATTCAACGTCACTGTCTACTGTTGTCTCAGAGGTTTCAGAGTAG 1275 0.4071 MAKTIVNLELSDSNLKLLGEEGAIPPLLEVLSGSIESKEQSLSALVKLSSIHARKGIIAASTGVPLILELMFSPRKQTLITIKCSEILEKLSVDDGGIDFFVDGEGKQLELDSIITNLLALQQSPNLAHNIRRPALHALLGICKFETGLVKKAVLAANGVSLILPFLDDPDLEVRETSINLLFLFSQHEPDGVVEYLFRPRRLGALARFLETDGNDVQMAAAGLIANLPKSERELTMNLIKLGGLDAIICIYTLEQWKQKKMLLVHSSAKARAAALIGNLSMSTPKLIVTAKSNGCWCFRSSRVFLCPAHDSICSVSYTFCLLEAQASPGLVKLLHGEVDVTAYEAIQTLSTSVVAEALGLLEKVFLSKEMVEHNGTTARLRLVGITRMNIYGEGVLKKKAAKVLSLLERYSTSLSTVVSEVSE 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1705 424 Gene3D - 107 413 IPR011989 -
Dere14g1705 424 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 267 352 - -
Dere14g1705 424 Gene3D - 1 106 IPR011989 -
Dere14g1705 424 SUPERFAMILY ARM repeat 2 345 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1705 Dere-ChrDere14 19285967 19287436 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1705 4 71 U-box Gene Family AT5G42340 39.130 1.58e-07 51.6