Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere14g1694 | ATGGCCTTTGTCACCAATTTGGAGCGAGTACAGGCGCTTCTGGGTTCGCCCCACAACCATAGTAAATTCAGCAAAAAATGGCATTCTGCTTTTGTTAGCATCTACTGTTCTCGAGTCCTCTTGTCTTACTTCAAATCCACTCAGTTTCCAACCTCCAACAACAAGAAGAATCCTAAGTTATCACCATCTTCCTCTTACACCATTGTCGATTTAAGCCAAGATGATTACTTCAGTGTTAGCCAAACCACCCTCACTCATCTTGTAAAGGACAAAAATGTAGAGACCCTTGAAACTCTTGGTGGGGTCCATGGTGTGGCTTCTGCTCTCAAAACCGACGTTGACTATGGAATCAAAGGCGGTGACGAGGATGCCAATGACATCACGTGCCGACACGACGTGTTTGGTTCAAACACGTACCCGAAACCACCTCAGAGAAGTTTGTTCCATTTTGTAATCGAAGCATTCAAGGACCCCACCATTCTCATTCTCCTGGTTTGTGCTGCTCTGTCTCTCGGCTTCGGCATCAAGGAAAACGGACTGAAAGAAGGGTGGTACGATGGCGGAAGCATCTTCGTTGCTGTTTTTCTCGTCATTGCTGTGTCTTCCATTAGTAACTTCAGACAGAACAGGCAGTTTGACAAGCTATCCCGTGTGAGCAACGACATCCAAGTCGATGTCCTACGAAGTGGTCGGCGGCAACATGTCTCGATCTATGATGTAGTAGTCGGTGATGTTGTTTGGTTGAAGATCGGAGACCAAGTTCCCGCTGATGGATTATTCTTGGAAGGCCATTCTCTGCAAGTGGACGAGTCAAGCATGACAGGGGAGAGTGACCATGTCGATGTTGATGGTAAGCAGAACCCATTTCTATTCTCCGGGACCAAAGTAGCTGATGGGTTTGCCAAAATGCTCGTTACTTCCGTTGGTACCAACACGACATGGGGTCAAATGATGGGTTCCATAAGCAGAGACAATAATGAACAAACCCCTTTGCAAGCACGCCTCAATAAACTCACTTCAGCGATAGGTAAGGTTGGTTTGGCTGTGGCTTTTCTTGTTCTTGTTGTCCTGTTGATTCGTTACTTCACTGGGAACACAAAAGACGAGAATGGGAATAAAGAATTCAGCGGGAAGAACACTAAGTTTGATGACATATTGAATGGAGTTGTGGGAATTGTTGCTGCTGCTGTTACTATCGTTGTGGTTGCGATTCCTGAAGGGCTTCCTTTGGCTGTGACTTTGACTCTGGCTTATTCGATGAAGAAGATGATGGCTGATATGGCTATGGTGAGGAAGCTCTCTGCGTGTGAGACAATGGGGTCTGCTACAACTATTTGTACTGATAAGACAGGGACTCTTACCCTTAACCAGATGAAAGTAACCAAGTTCTGGCTTGGACAACAACCTCTGGCAGAGGGAGCTCACAAATCATCAGTTCATTTAGATGTTCTTCGACTAATCCGAGAAGGGGTTGCTCTTAACACAACAGGTAGTGTTTACAAGTCTAAATCATCAGATTCTGAATATGAGTTTTCAGGTAGTCCAACTGAAACGGCCATTCTTTCGTGGGCTGTTCTTGATTTGGAGATGAACATGGAGGAATTTACCCGAAATTGCTCCGTCCTCCATGTGGAAGCCTTCAACTCGAAGAAGAAAAGAAGTGGGGTTTTGATCAGAAGGAAAGAAGACAACAAAATCCACGTACACTGGAAAGGAGCAGCTGAGATGGTACTAGGAATGTGTTCAAGGTACTATGATGCTTCTGGCAAAATAAAAGATCTTGACAATAGCAACAAGTTGGTTTTCGGGCAAATCATTCAAGGAATGGCAGCCAGCAGCCTTAGGTGTATTGCTTTTGCACATACAGAGATGGCAGAAGATGAAGGAAGCAACAAGGTAAGAGAAGAAGGCCTCACCCTCTTAGGACTTGTTGGTATTAAGGATCCATGTCGTCCTGGTGTTAAGAAAGCAGTCCAGGATTGCCAACACGCAGGAGTGAACGTCAAAATGATCACAGGAGACAATATTTTCACAGCAAAAGCCATAGCCACAGAATGTGGCATCCTCATGCCAAATCAAGACACTGTGGAAGCTGTGATAGAAGGAGAAGAATTTCGCAACATGTCACCCGAAGAAAGACTAGAGAAAGTGGAGAAGATTTGCGTGATGGCACGATCCTCTCCCTTTGACAAGCTCTTAATGGTTCAGTGCCTCAAACAAAAAGGTCATGTTGTTGCAGTCACAGGAGATGGCACAAATGATGCACCAGCATTGAAGGAAGCTGATATAGGACTTTCCATGGGGATTCAAGGCACTGAAGTGGCAAAAGAGAGCTCAGATATAGTTGTCTTGGATGATAATTTTGCCTCTGTAGCCACAGTTCTGAAGTGGGGAAGATGTGTCTATAACAACATCCAAAAGTTCATTCAGTTTCAGCTGACAGTAAATGTGGCTGCTCTTACAATTAACTTTGTGGCTGCAGTATCAGCAGGGGAAGTGCCATTAACAGCAGTTCAACTATTGTGGGTGAACTTGATCATGGATACTTTGGGTGCTCTAGCTCTAGCTACAGAGAAGCCTACAATGGAGCTAATGGACAAACCCCCTGTGGGTAGAACTGAGCCTCTCATCACCAACATCATGTGGAGAAATCTTTTAGCCCAAGCTTTGTACCAAATTACAATTCTATTGACACTACAGTTCAAGGGTGAAGCTATATTTGGGGTGAGTTCAGAGGTAAATGACACTTTGATTTTTAACACATTTGTGCTTTGTCAAGTGTTCAACGAGTTTAATGCAAGGAAGTTGGAGAAGAAGAATGTGTTCAAGGGGCTTCATAGGAACAGGTTGTTTTTGGGGATCATAGGGATAACCATTGTGCTTCAGGTGGTGATGGTGGAGTTTCTGAAGAAATTTGCGGATACTCAGAGGTTGAATTGGGGACAGTGGGGTGCTTGCATTATAATTGCAGCTATTTCTTGGCCTATTGGTTGGGTTGTAAAGTTCATTCCTGTCCCCAAGAAGCCATTGCTTAGTTTTCTGAACATGAAGAAGCAATGA | 3060 | 0.4444 | MAFVTNLERVQALLGSPHNHSKFSKKWHSAFVSIYCSRVLLSYFKSTQFPTSNNKKNPKLSPSSSYTIVDLSQDDYFSVSQTTLTHLVKDKNVETLETLGGVHGVASALKTDVDYGIKGGDEDANDITCRHDVFGSNTYPKPPQRSLFHFVIEAFKDPTILILLVCAALSLGFGIKENGLKEGWYDGGSIFVAVFLVIAVSSISNFRQNRQFDKLSRVSNDIQVDVLRSGRRQHVSIYDVVVGDVVWLKIGDQVPADGLFLEGHSLQVDESSMTGESDHVDVDGKQNPFLFSGTKVADGFAKMLVTSVGTNTTWGQMMGSISRDNNEQTPLQARLNKLTSAIGKVGLAVAFLVLVVLLIRYFTGNTKDENGNKEFSGKNTKFDDILNGVVGIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADMAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGQQPLAEGAHKSSVHLDVLRLIREGVALNTTGSVYKSKSSDSEYEFSGSPTETAILSWAVLDLEMNMEEFTRNCSVLHVEAFNSKKKRSGVLIRRKEDNKIHVHWKGAAEMVLGMCSRYYDASGKIKDLDNSNKLVFGQIIQGMAASSLRCIAFAHTEMAEDEGSNKVREEGLTLLGLVGIKDPCRPGVKKAVQDCQHAGVNVKMITGDNIFTAKAIATECGILMPNQDTVEAVIEGEEFRNMSPEERLEKVEKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVVLDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALTINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTMELMDKPPVGRTEPLITNIMWRNLLAQALYQITILLTLQFKGEAIFGVSSEVNDTLIFNTFVLCQVFNEFNARKLEKKNVFKGLHRNRLFLGIIGITIVLQVVMVEFLKKFADTQRLNWGQWGACIIIAAISWPIGWVVKFIPVPKKPLLSFLNMKKQ | 1019 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere14g1694 | 1019 | SFLD | C1.7: P-type atpase like | 428 | 801 | - | - | |
| Dere14g1694 | 1019 | SMART | Cation_ATPase_N_a_2 | 101 | 175 | IPR004014 | - | |
| Dere14g1694 | 1019 | Gene3D | - | 443 | 793 | IPR023214 | - | |
| Dere14g1694 | 1019 | CDD | P-type_ATPase_Ca_PMCA-like | 130 | 881 | - | - | |
| Dere14g1694 | 1019 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 448 | 454 | IPR018303 | - | |
| Dere14g1694 | 1019 | PRINTS | H+-transporting ATPase (proton pump) signature | 602 | 620 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Dere14g1694 | 1019 | PRINTS | H+-transporting ATPase (proton pump) signature | 748 | 764 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Dere14g1694 | 1019 | PRINTS | H+-transporting ATPase (proton pump) signature | 780 | 805 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Dere14g1694 | 1019 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 452 | 654 | IPR023299 | GO:0000166 | |
| Dere14g1694 | 1019 | Pfam | Cation transporter/ATPase, N-terminus | 100 | 170 | IPR004014 | - | |
| Dere14g1694 | 1019 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 100 | 1005 | IPR023298 | - | |
| Dere14g1694 | 1019 | Gene3D | - | 153 | 1003 | - | - | |
| Dere14g1694 | 1019 | Pfam | E1-E2 ATPase | 222 | 424 | - | - | |
| Dere14g1694 | 1019 | FunFam | Calcium-transporting ATPase | 765 | 1007 | - | - | |
| Dere14g1694 | 1019 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 67 | 1005 | IPR006408 | GO:0005388|GO:0005524|GO:0016020|GO:0070588 | |
| Dere14g1694 | 1019 | Gene3D | - | 127 | 322 | - | - | |
| Dere14g1694 | 1019 | NCBIfam | HAD-IC family P-type ATPase | 190 | 363 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Dere14g1694 | 1019 | NCBIfam | HAD-IC family P-type ATPase | 388 | 472 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Dere14g1694 | 1019 | NCBIfam | HAD-IC family P-type ATPase | 721 | 829 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Dere14g1694 | 1019 | FunFam | Calcium-transporting ATPase | 643 | 793 | - | - | |
| Dere14g1694 | 1019 | PANTHER | CATION TRANSPORTING ATPASE | 64 | 1005 | - | - | |
| Dere14g1694 | 1019 | SUPERFAMILY | HAD-like | 444 | 853 | IPR036412 | - | |
| Dere14g1694 | 1019 | SFLD | p-type atpase | 428 | 801 | IPR044492 | - | |
| Dere14g1694 | 1019 | SUPERFAMILY | Calcium ATPase, transduction domain A | 222 | 320 | IPR008250 | - | |
| Dere14g1694 | 1019 | Gene3D | - | 456 | 649 | IPR023299 | GO:0000166 | |
| Dere14g1694 | 1019 | PRINTS | P-type cation-transporting ATPase superfamily signature | 664 | 674 | - | - | |
| Dere14g1694 | 1019 | PRINTS | P-type cation-transporting ATPase superfamily signature | 748 | 767 | - | - | |
| Dere14g1694 | 1019 | PRINTS | P-type cation-transporting ATPase superfamily signature | 772 | 784 | - | - | |
| Dere14g1694 | 1019 | PRINTS | P-type cation-transporting ATPase superfamily signature | 269 | 283 | - | - | |
| Dere14g1694 | 1019 | PRINTS | P-type cation-transporting ATPase superfamily signature | 446 | 460 | - | - | |
| Dere14g1694 | 1019 | PRINTS | P-type cation-transporting ATPase superfamily signature | 642 | 653 | - | - | |
| Dere14g1694 | 1019 | FunFam | Calcium-transporting ATPase | 456 | 649 | - | - | |
| Dere14g1694 | 1019 | Pfam | Cation transporting ATPase, C-terminus | 833 | 1003 | IPR006068 | - | |
| Dere14g1694 | 1019 | FunFam | Calcium-transporting ATPase | 195 | 322 | - | - | |
| Dere14g1694 | 1019 | Pfam | haloacid dehalogenase-like hydrolase | 443 | 762 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dere14g1694 | Dere-ChrDere14 | 19140145 | 19143204 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dere14g1694 | 10 | 1019 | Primary Pumps ATPases | AT3G22910 | 70.403 | 0.0 | 1350 |