Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1692 ATGGCAGCCAGCAGCCTTAGGTGTATAGCTTTTGCACAAAGAGAAGAGGCTGAAGATGAGGGAAGCAACAAGGTAAGAGAAGAAGGCCTCACCCTCTTAGGACTTGTCGGTATTAAGGATCCATGTCGTCCAGGTGTAAAGAATGCAGTCCAGGATTGCCAACAAGCAGGAGTCAATGTCAAAATGATCACAGGAGACAACATTTTCACAGCAAAAGCCATAGCCACAGAATGCGGCATCCTCAGGCCAAATCAGGACACCATGGAAGCAGTAATCCAAGTAGAGGAATTTCGCAGCATGTCACCTGAAGAAAGACTAGAGAAAGTGGAGAAGATCTGTGTGATGGCTCGTTCCTCTCCCTTTGACAAACTCCTAATGGTTCAGTGCCTCAAACAGAAAGGTCATGTAGTTGCAGTCACAGGAGATGGCACAAATGATGCACCAGCTTTGAAGGAAGCTGATATAGGACTTTCCATGGGGATTCAAGGCACTGAAGTGCCAAAAGAGAGCTCAGATATAGTTATCTTGGATGACAATTTTGCCTCCGTAGCCTCAGTTCTGAAGTGGGGAAGATGTGTCTATAATAACATCCAAAAGTTCATTCAGTTTCAATTAACAGTAAATGTTGCTGCACTTGCAATTAACTTCGTTGCTGCAGTATCAGCAGGAATAGTGCCATTAACAGCAGTTCAACTATTGTGGGTGAACTTGATCATGGACACTTTGGGTGCTCTAGCTTTAGCTACAGAGAAGCCTACAATGGAGTTAATGGACAAACGCCCAGTGGGTAGAACTGAGCCTCTCATCACTAACGTCATGTGGAGAAATCTGTTAGCCCAAGTTCTATACCAAATCACAATTCTATTGACACTACAGTTCAAGGGTGAAGCCATATTTGGGGTGAGTTCCGGGGTAAATGACACTTTAATTTTTAACACATTTGTGCTTTGTCAAGTGTTCAATGAGTTCAATGCAAGGAAGCTGGAGAAGAAGAATGTGTTCAAGGGGCTTCACGGGAACAAGTTGTTTCTGGGGATCATGGGGATAACCATTGTGCTTCAGGTGGTGATGGTGGAGTTTCTGAAGAAATTTGCAGATACTGAGAGGTTGAATAGGGGACAGTGGGGTGCTTGCATTATAATTGCAGCTATTTCTTGGCCTATTGGTTGGGCTGTAAAGTTCATTCCTGTCCCCAAGAAGCCATTGCTTAGTTTTCTAAACAAGAAGAAGCAATGA 1236 0.4393 MAASSLRCIAFAQREEAEDEGSNKVREEGLTLLGLVGIKDPCRPGVKNAVQDCQQAGVNVKMITGDNIFTAKAIATECGILRPNQDTMEAVIQVEEFRSMSPEERLEKVEKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVPKESSDIVILDDNFASVASVLKWGRCVYNNIQKFIQFQLTVNVAALAINFVAAVSAGIVPLTAVQLLWVNLIMDTLGALALATEKPTMELMDKRPVGRTEPLITNVMWRNLLAQVLYQITILLTLQFKGEAIFGVSSGVNDTLIFNTFVLCQVFNEFNARKLEKKNVFKGLHGNKLFLGIMGITIVLQVVMVEFLKKFADTERLNRGQWGACIIIAAISWPIGWAVKFIPVPKKPLLSFLNKKKQ 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1692 411 NCBIfam calcium-translocating P-type ATPase, PMCA-type 1 397 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Dere14g1692 411 Gene3D - 3 41 IPR023299 GO:0000166
Dere14g1692 411 SUPERFAMILY Calcium ATPase, transmembrane domain M 190 397 IPR023298 -
Dere14g1692 411 Pfam Cation transporting ATPase, C-terminus 225 395 IPR006068 -
Dere14g1692 411 NCBIfam HAD-IC family P-type ATPase 112 230 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere14g1692 411 FunFam Calcium-transporting ATPase 35 185 - -
Dere14g1692 411 PANTHER CATION TRANSPORTING ATPASE 1 397 - -
Dere14g1692 411 PRINTS P-type cation-transporting ATPase superfamily signature 164 176 - -
Dere14g1692 411 PRINTS P-type cation-transporting ATPase superfamily signature 140 159 - -
Dere14g1692 411 PRINTS P-type cation-transporting ATPase superfamily signature 56 66 - -
Dere14g1692 411 PRINTS P-type cation-transporting ATPase superfamily signature 34 45 - -
Dere14g1692 411 Pfam haloacid dehalogenase-like hydrolase 28 154 - -
Dere14g1692 411 Gene3D - 42 185 IPR023214 -
Dere14g1692 411 FunFam Calcium-transporting ATPase 157 399 - -
Dere14g1692 411 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 1 46 IPR023299 GO:0000166
Dere14g1692 411 Gene3D - 186 394 - -
Dere14g1692 411 SUPERFAMILY HAD-like 31 245 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1692 Dere-ChrDere14 19057763 19058998 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1692 1 411 Primary Pumps ATPases AT3G22910 77.966 0.0 644