Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1687 ATGTCTGCTGGTATTCGAAATTTTAAGCAAATGGCAGAAGAAAATGTAGTCAAAACTTTTCATCCATACCGATTAACTTGGCGTGTAAAACCGTTGAGCAACCTCATCGTTAAGTCCTTCTTTCCGCACTTTACTGCTGTTATTGCTCATTTTGCTGACCTGCATTTTCCGTCTTTGGTTTTTCTTGTATTCGTAGCTGAAGCAACGGTACTGTGTGCCAGATACAAGCCAGCCAGCATGCCAGTGAGACAGATGAAAGAAAGCTCGGAGCAGCATCTTGTGATCAAAACCCACTTGCAAAACTCCATGAATCCAGCGAAGAAAACGCCTAAAACGGTCCAAAATGGCAAAGGTCCACCGCCACAAGAACTCCACAGTACCAAACCCCATAGCCAGAATCAACCTTCGCCTCAGGCGAAGAACGGAGGGAGAAGAAGGAGCCGAGGAGGCCGAAAGTCCGATCAAGGCGATGTTCCGATGCGACCCACTTGCCGACCCTGCACTGTGGCTAATAAACCACTATCAGCAAACCGGGGTCAGGTTATGGTATCAAATACCGTAAATGGATCTGTTGAAAATGGCGCCAACAACTCATGTGATGTAGTGATGGGTTTTCCTACTTCAAGCAAATCTTTGAGCTTCGCTCCGAGGCCTGGGTACGGACAAGTTGGGACAAAATGCATTGTGAAGGCTAACCATTTCTTTGCAGAGTTGCCGGACAAGGACCTGAACCAGTATGATGTCACTATTACCCCTGAAGTGTCGTCTAGAACAGTAAACAGGGCCATCATGGCAGAACTTGTGAGACTGTACAAGGAGACTGACTTGGGGATGAGACTTCCTGCATATGATGGCAGAAAAGGTCTGTACACAGCAGGGGAGCTTCCCTTTGCTTGGAGAGAGTTTAAAATTAAGCTTGTAGATGAAGAGGATGGAATTAATGGTCCCAAAAGGGAAAGAGAATATAGAGTGGTGATTAAGTTTGTTGCTCGGGCAAACTTGCATCACTTAGGCCAGTTTCTAGCTGGTAAGCGTGCTGATGCTCCGCAGGAGGCACTTCAGATTCTGGACATTGTACTAAGAGAGCTATCAACTAAGAGGTTTTGCCCTATCGGGAGGTCCTTCTTTTCACCTGATATTAGAATGCCACAACGACTTGGAGAGGGATTGGAGTCATGGTGTGGATTTTACCAGAGCATAAGGCCTACTCAGATGGGCCTTTCCCTCAATATTGATATGGCTTCTGCTGCGTTTATTGAGCCTCTTCCAGTTGTTGAATTTGTTGGCCAGCTGTTAGGGAAAGATGTGTTGTCAAGGCCATTGTCTGATGCTGATCGTGTGAAGATAAAGAAAGCCCTTAGAGGAGTTAAAGTTGAAGTAACACACAGAGGAAGTGTAAGAAGAAAATATCGTGTTTCAGGGTTGACTTCTCAACCAACAAGAGAACTTGTGTTTCCCGTTGATGACAACTCAACTATGAAATCAGTTGTTGAGTACTTCCAAGAGATGTATGGCTTCACTATTCAATATACTCACCTTCCTTGCCTTCAAGTAGGAAACCAAAAGAAGGCAAACTATTTGCCCATGGAGGCATGCAAAATTGTTGAGGGGCAACGTTATACAAAAAGGCTGAATGAGAAGCAAATTACTAATTTGCTGAAGGTTACTTGCCAAAGACCCCGCGATCGGGAAAATGACATTTTGCGGACCATTCAACATAATGCTTATGATCATGATCCTTATGCAAAGGAGTTTGGGATTAAGATCAGTGAAAAACTAGCTTCTGTCGAAGCACGAATTCTTCCTGCCCCTTGGCTGAAATATCATGACACAGGGAAAGAAAAGAACTGTTTACCCCAAGTTGGTCAGTGGAATATGATGAACAAGAAAATGATTAATGGGATGACTGTTAGCCGGTGGGCATGCATTAATTTTTCCCGAAATGTGCAAGATAGTGTTGCTCGCAGTTTTTGTAGTGAACTTGCTCAAATGTGTCAAGTATCTGGCATGGAATTTAATCTAGACCCTGTTATTCCAATATACAATGCTAAGCCTGAGCAGGTGGAGAAAGCTTTAAAGCATGTTTATCATGTGTCAATGAACAAAACTAAAGGAAAGGAATTGGAGCTTCTCTTAGTGATATTGCCTGATAACAATGGGTCTCTTTATGGTGATCTCAAGCGAATTTGTGAAACTGACCTTGGTTTAATTTCTCAATGTTGCCTGACAAAGCATGTCTTTAAGATCACTAAACAGTATTTGGCTAATGTGTCTCTGAAGATCAATGTTAAGATGGGAGGGAGAAACACTGTTCTTCTTGATGCTATAAGCTGCAGAATACCATTGGTTAGTGATATTCCTACCATAATATTTGGAGCAGATGTTACACACCCTGAAAATGGAGAAGATTCCAGTCCCTCAATAGCAGCTGTAGTAGCTTCCCAAGACTGGCCTGAAGTGACAAAATATGCTGGTTTAGTGTGTGCTCAAGCCCACAGACAGGAACTTATTCAAGATTTGTACAAAACTTGGCATGATCCTGTTCGTGGTACAGTCAGTGGTGGCATGATCCGTGACTTGTTGGTCTCCTTTAGAAAGGCAACAGGACAGAAGCCACTAAGGATTATATTTTACAGGGATGGTGTAAGTGAAGGGCAGTTTTATCAAGTTCTACTTTATGAGTTAGATGCAATCCGGAAGGCATGTGCTTCTTTAGAGCCAAACTATCAGCCACCGGTAACTTTTATTGTCGTACAAAAAAGACACCATACTAGGTTGTTTGCAAACAACCACAGGGACAAGAGCAGCACAGATAAGAGTGGGAATATATTGCCGGGGACTGTTGTTGATTCTAAAATCTGTCATCCAACAGAATTTAATTTTTATCTCTGCAGTCATGCCGGCATCCAGGGGACCAGTCGACCAGCCCATTATCATGTTCTATGGGATGAGAACAACTTTACAGCAGATGGTATTCAGTCTTTGACAAACAATCTCTGTTATACATATGCTAGATGTACGCGATCTGTATCTGTTGTTCCTCCAGCATATTATGCGCATTTAGCAGCATTTCGGGCCCGTTTCTACATGGAACCAGACATGCAGGAGAATGGCTCTACTGGTGGTGGTAGTGCCAGTCATGGTTCCAAAGGAACGCGAGCAGCTGGAGAGTGTGGGGTCCGGCCATTGCCAGCCTTGAAAGAAAATGTGAAGAGGGTAATGTTTTATTGTTAG 3234 0.4351 MSAGIRNFKQMAEENVVKTFHPYRLTWRVKPLSNLIVKSFFPHFTAVIAHFADLHFPSLVFLVFVAEATVLCARYKPASMPVRQMKESSEQHLVIKTHLQNSMNPAKKTPKTVQNGKGPPPQELHSTKPHSQNQPSPQAKNGGRRRSRGGRKSDQGDVPMRPTCRPCTVANKPLSANRGQVMVSNTVNGSVENGANNSCDVVMGFPTSSKSLSFAPRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVSSRTVNRAIMAELVRLYKETDLGMRLPAYDGRKGLYTAGELPFAWREFKIKLVDEEDGINGPKREREYRVVIKFVARANLHHLGQFLAGKRADAPQEALQILDIVLRELSTKRFCPIGRSFFSPDIRMPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVEFVGQLLGKDVLSRPLSDADRVKIKKALRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDDNSTMKSVVEYFQEMYGFTIQYTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITNLLKVTCQRPRDRENDILRTIQHNAYDHDPYAKEFGIKISEKLASVEARILPAPWLKYHDTGKEKNCLPQVGQWNMMNKKMINGMTVSRWACINFSRNVQDSVARSFCSELAQMCQVSGMEFNLDPVIPIYNAKPEQVEKALKHVYHVSMNKTKGKELELLLVILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGTVSGGMIRDLLVSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDKSSTDKSGNILPGTVVDSKICHPTEFNFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQENGSTGGGSASHGSKGTRAAGECGVRPLPALKENVKRVMFYC 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1687 1077 ProSiteProfiles Piwi domain profile. 710 1031 IPR003165 GO:0003676
Dere14g1687 1077 Gene3D - 600 773 - -
Dere14g1687 1077 Pfam Argonaute linker 1 domain 370 419 IPR014811 -
Dere14g1687 1077 Pfam Mid domain of argonaute 619 696 IPR032473 -
Dere14g1687 1077 FunFam Protein argonaute-2 415 541 - -
Dere14g1687 1077 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 204 1032 - -
Dere14g1687 1077 Pfam N-terminal domain of argonaute 226 360 IPR032474 -
Dere14g1687 1077 Gene3D - 779 1077 IPR036397 GO:0003676
Dere14g1687 1077 CDD Piwi_ago-like 580 1030 IPR045246 -
Dere14g1687 1077 SMART Piwi_a_2 710 1031 IPR003165 GO:0003676
Dere14g1687 1077 Pfam Argonaute linker 2 domain 562 608 IPR032472 -
Dere14g1687 1077 Pfam Piwi domain 711 1030 IPR003165 GO:0003676
Dere14g1687 1077 SUPERFAMILY Ribonuclease H-like 700 1032 IPR012337 -
Dere14g1687 1077 FunFam protein argonaute 10-like 779 1077 - -
Dere14g1687 1077 Gene3D paz domain 415 540 - -
Dere14g1687 1077 Pfam PAZ domain 448 553 IPR003100 GO:0005515
Dere14g1687 1077 MobiDBLite consensus disorder prediction 97 171 - -
Dere14g1687 1077 MobiDBLite consensus disorder prediction 1035 1055 - -
Dere14g1687 1077 SMART DUF1785_2 369 421 IPR014811 -
Dere14g1687 1077 SUPERFAMILY PAZ domain 416 576 IPR036085 GO:0005515
Dere14g1687 1077 CDD PAZ_argonaute_like 421 535 - -
Dere14g1687 1077 SMART PAZ_2_a_3 426 558 IPR003100 GO:0005515
Dere14g1687 1077 FunFam Argonaute 10 600 773 - -
Dere14g1687 1077 MobiDBLite consensus disorder prediction 97 141 - -
Dere14g1687 1077 ProSiteProfiles PAZ domain profile. 422 536 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1687 Dere-ChrDere14 18893833 18902727 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1687 80 1077 Eukaryotic Initiation Factors Gene Family AT5G43810 80.375 0.0 1665