Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1686 ATGAAGCTTCTTCAGTCTGAGGAAACTGCCTCTGAGGCTCGCGGCGACTTTCCTGAGGAAGCCGAAGAACAGAATTCATCCAGCTCCTCTTTGGTTGAAGGCAATGACCGTGGCGTTGATCATGGGGATGCGGTTCTCGACGTCTCTGGGAAAACCGTGGAGTTTCCGGTATTGGAGAACGCAGAAGATTCCGTGGAGGGTTTGTATTTTTATAAGAACGTCTATAATTTAATTCCCAAGTATCTGGGAGGTCTTGAACGGTTGAGGACATTGAAGTTCTTCGGGAATGAGATTAATTTGTTTGCCCCGGAGTTCGGAAACTTAACGGGGTTGGAGTGCTTGCAAATGAAGATATCGTCGCCGGGACTTGGCGGGTTGCCATTGCATAAGTTGAAGGGTTTGAAAGAGCTGGAGTTGTCCAAAGTGCCTCCCCGGCCTTCTGCTTTTCCTATATTGACCGAGATTGCTGGTCTTAAGTGCTTGACCAAGCTATCTATTTGCCACTTTTCTATAAGATACCTTCCTCCAGAAATTGGCTGCCTAAAGAAACTGGAGTATCTTGATCTTTCATTCAATAAGATGAAGACATTGCCCTCTGAAATTAGTTATTTGAATGGCTTGATATCTTTGAGAGCTTCCAATAATAAGTTGGTGGAACTACCATCAACTATGGCTTCTCTGTCCAGGCTGGAGAACTTGGACCTGTCAAATAATAGGTTGACTTCATTGGGGCCTCTTGAACTTGGGTCTATGCATAAACTTCAGAGTTTAAATCTTCAGTTCAATAAGCTGCTCAATATATGCCAAATACCTTCATGGATTTGCTGCAATATGGAAGGAAATGACAAAGGTGAATGCAGTGATGATTTTAGCAGTTCTTCTGTTGAAATGGATGTCTATCAAGAGAATGATGGAATCCTTTCACATGGTTCTTACAATACCTCATCAAGCCTATTAAGTAACTCCTCATCTAACAGCAGATGTTATGCAGCCCGAAAATCAGGTAAAAGGTGGAAGCGACAACATTATTTACAGCAGAAGGCCCGTCAAGAATGCTTAAACAACAGCAGGAAGTGGAAAGGCTTTGATAATTCTCAGTTGCTAAGTAACAAGGTCCATAGAATTTGTGAACCAGAAAACCTAGACAGTCTTTCTTCTGAAAACTGCAGAGAAACTGTATCAGATAATGTGGATCTGGATGATGATGCTAAGAAAATATTCTCAGAAGAAGCTGAAAATGACAATGTAATTGATGATGTTAACAATAATGAAGTGGTTATCAAAAAGCAGTTTTCTAAAGAAGATTGCTGCTCTAGTAAAAGTGAAGATGAAAAAGATGCTTCCTTACTCTCCTTAGAGAATGGGCCTAGTGAGCAGGACAATGCATCAAGTTTGGAAAATTTGAATTGTGTTTCTAAATCAAAGAGGCATTCAGATGGGGATCTTGATAATCCTAAACCATGCAAGTCTAGAAAACCAATTGGTGATAGCTCATTGTTGTCCTACAAGTACAGTAGCTTATCATTTTGTGGCACTGAAGACCATCTGCCAGATGGCTTTTATGATGCAGGACGTGATCGGCCTTTTATGCCACTTGAGAGTTATGAGCAGAATCAGTGTCTTGCCTCTCGTGAAGTCATCTTATTGGACAGAGAAAGGGATGAACAATTGGATGCCATCACACTCTCTGCTCAGGCATTGGTATTTCATTTGAAGCAGTTAAGTGATTTTACCAAACATGGGAATCAGGCTGCTATTGATAACTTCCAGATTGCTTCACTTCTTGCACTCTTTGTATCAGATCATTTTGGGGGCAGTGATAGAAGTGCTATAGTAGAAAGGACACGAAAATCAGTGTCTGGTTCAAACTATCTTAAGCCTTTTGTCTGTACATGCTCAACTGGAAGCAACAGTGATATTAGTGCTTCCACTAAACCAGTTGTAAACAGTGTGGAAGATATCACTCTTACTAACATCTGTGAAAAATCTCTCGAGTCCATTAAAAGAAGACAAGATTCAATCATAGTTCCCATTGGATCTGTGCAGTTCGGTGTGTGTAGACATAGAGCTTTGCTTTTGAAGTATTTATGTGATCACATGGAGCCTCCAGTACCTTGTGAGCTTGTAAGGGGTTTCCTGGATTTTTCACCACATGCCTGGAACATCATCCTAGTTAACAGAGGTGATACACAGGTTAGAATGCTAGTTGATGCATGCCGGCCACACGATATAAGGGAAGAGGATGACCATGAGTTCTTTTGCAGGTATATACCTCTTAGTCGAACCCAAGTTGCTCTTTCAACTGATGGAAATCCTGGTCCTGGTTGTTCTTTTCCATCTCTCTCGACATGTGATGAATTTGAGAAGGCAACTTCAAGTACATTAGTTCGGTGCAAATTGGGATCAGTTGAGGCTGCTGCTAAGGTGCGTACTTTAGAAGTAAAGGAGAGTTCGCCTGACAAAACAAAAAACTTTGAATATAATTGTATGGGAGAAGTGAGAATTCTTGGTGCTTTGAAGCACCCCTGTATAGTTGAAATGTATGGACACCAAATATCTTACCAGTGGACTCTTTCAGCAGATAATAATCCTAAGCATTGTGTATTAAGGTCTGCTATTTTCATGGAGTACATGGAAGGGGGATCTTTAAGAAACTATATAGATAAGCTATCAAAAGCTGGTGAAAAGCATGTTCCAGTAGAGTTGGCTTTGTATATTGCCAAAGATGTGGCATGTGCCTTGTCAGAGTTGCACTCGAAGCATATAATTCATCGTGACATAAAAAGTGAAAACATTTTGATTGATTTGGATAGAAAAAAAGATGATGGCGCTCCCACAGTGAAGCTTTGTGATTTTGATAGTGCAGTGCCACTAAGATCACCTTTGCATACATGCCTTATCGCTCATGTGGGAGCACCTCCTCCTTACGTATGTGTTGGAACACCACGTTGGATGGCTCCAGAGGTTATGCGGACTATGTATAAAGAAAAGAGTTATGGATTGGAAGCTGATATTTGGTCGTTTGGATGCTTACTTCTGGAGCTTCTGACCCTGCAAATTCCTTATTCTGGGGTACCTGATGTCCAATTCCATGACATCTTGCAGATGGGTGAACCACCACAATTAACTGATGATCTGGAGGCACTGAGTTCACTAACTGAACCCACAATGATTCAATCTGGTGAAGAGCCAGAAAAATCAGACACAGAAGCAGTCGTTGTGAAATTTCTTGTTGATTTGTTTCGTAGGTGTGTGGAAGAAAATCCAGCCAAACGTCCTACGGCTGAAGAAATATATGAAATGCTGCTTGAACAAACAAGCCGTCTACAAGTTCAAGATGTTAGAAAGAGTTAG 3354 0.412 MKLLQSEETASEARGDFPEEAEEQNSSSSSLVEGNDRGVDHGDAVLDVSGKTVEFPVLENAEDSVEGLYFYKNVYNLIPKYLGGLERLRTLKFFGNEINLFAPEFGNLTGLECLQMKISSPGLGGLPLHKLKGLKELELSKVPPRPSAFPILTEIAGLKCLTKLSICHFSIRYLPPEIGCLKKLEYLDLSFNKMKTLPSEISYLNGLISLRASNNKLVELPSTMASLSRLENLDLSNNRLTSLGPLELGSMHKLQSLNLQFNKLLNICQIPSWICCNMEGNDKGECSDDFSSSSVEMDVYQENDGILSHGSYNTSSSLLSNSSSNSRCYAARKSGKRWKRQHYLQQKARQECLNNSRKWKGFDNSQLLSNKVHRICEPENLDSLSSENCRETVSDNVDLDDDAKKIFSEEAENDNVIDDVNNNEVVIKKQFSKEDCCSSKSEDEKDASLLSLENGPSEQDNASSLENLNCVSKSKRHSDGDLDNPKPCKSRKPIGDSSLLSYKYSSLSFCGTEDHLPDGFYDAGRDRPFMPLESYEQNQCLASREVILLDRERDEQLDAITLSAQALVFHLKQLSDFTKHGNQAAIDNFQIASLLALFVSDHFGGSDRSAIVERTRKSVSGSNYLKPFVCTCSTGSNSDISASTKPVVNSVEDITLTNICEKSLESIKRRQDSIIVPIGSVQFGVCRHRALLLKYLCDHMEPPVPCELVRGFLDFSPHAWNIILVNRGDTQVRMLVDACRPHDIREEDDHEFFCRYIPLSRTQVALSTDGNPGPGCSFPSLSTCDEFEKATSSTLVRCKLGSVEAAAKVRTLEVKESSPDKTKNFEYNCMGEVRILGALKHPCIVEMYGHQISYQWTLSADNNPKHCVLRSAIFMEYMEGGSLRNYIDKLSKAGEKHVPVELALYIAKDVACALSELHSKHIIHRDIKSENILIDLDRKKDDGAPTVKLCDFDSAVPLRSPLHTCLIAHVGAPPPYVCVGTPRWMAPEVMRTMYKEKSYGLEADIWSFGCLLLELLTLQIPYSGVPDVQFHDILQMGEPPQLTDDLEALSSLTEPTMIQSGEEPEKSDTEAVVVKFLVDLFRRCVEENPAKRPTAEEIYEMLLEQTSRLQVQDVRKS 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1686 1117 Pfam Ethylene-responsive protein kinase Le-CTR1 655 737 - -
Dere14g1686 1117 SMART LRR_sd22_2 227 248 - -
Dere14g1686 1117 SMART LRR_sd22_2 251 272 - -
Dere14g1686 1117 SMART LRR_sd22_2 181 206 - -
Dere14g1686 1117 MobiDBLite consensus disorder prediction 1 38 - -
Dere14g1686 1117 FunFam Leucine-rich repeat protein kinase family protein 54 296 - -
Dere14g1686 1117 Pfam Protein kinase domain 814 1100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1686 1117 ProSiteProfiles Leucine-rich repeat profile. 229 250 IPR001611 GO:0005515
Dere14g1686 1117 Gene3D Ribonuclease Inhibitor 45 287 IPR032675 -
Dere14g1686 1117 SMART LRR_typ_2 227 250 IPR003591 -
Dere14g1686 1117 SMART LRR_typ_2 85 107 IPR003591 -
Dere14g1686 1117 SMART LRR_typ_2 181 204 IPR003591 -
Dere14g1686 1117 SMART LRR_typ_2 251 277 IPR003591 -
Dere14g1686 1117 MobiDBLite consensus disorder prediction 1 21 - -
Dere14g1686 1117 SUPERFAMILY RNI-like 68 277 - -
Dere14g1686 1117 PRINTS Leucine-rich repeat signature 227 240 - -
Dere14g1686 1117 PRINTS Leucine-rich repeat signature 184 197 - -
Dere14g1686 1117 FunFam Leucine-rich repeat protein kinase family protein 827 1108 - -
Dere14g1686 1117 ProSitePatterns Serine/Threonine protein kinases active-site signature. 922 934 IPR008271 GO:0004672|GO:0006468
Dere14g1686 1117 ProSiteProfiles Protein kinase domain profile. 789 1102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1686 1117 SUPERFAMILY Protein kinase-like (PK-like) 793 1103 IPR011009 -
Dere14g1686 1117 ProSiteProfiles Leucine-rich repeat profile. 253 274 IPR001611 GO:0005515
Dere14g1686 1117 ProSiteProfiles Leucine-rich repeat profile. 183 204 IPR001611 GO:0005515
Dere14g1686 1117 Pfam Leucine rich repeat 210 264 IPR001611 GO:0005515
Dere14g1686 1117 SMART serkin_6 781 1109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1686 1117 SMART LRR_bac_2 251 270 - -
Dere14g1686 1117 SMART LRR_bac_2 181 200 - -
Dere14g1686 1117 SMART LRR_bac_2 227 246 - -
Dere14g1686 1117 SMART LRR_bac_2 204 223 - -
Dere14g1686 1117 Gene3D Transferase(Phosphotransferase) domain 1 782 1117 - -
Dere14g1686 1117 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 111 1108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1686 Dere-ChrDere14 18844330 18856120 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1686 809 1102 MAP Kinase Kinase Kinase AT2G24360 29.831 7.39e-26 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Dere14g1686 Pkinase 1.8e-40 CL0016