Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1681 ATGAATCGGGTGAAGGAGGAGCTTCCTGGAGCGAGTACCATGGCTCCTCCACAACCACTGGAGGGGCTACACGAAGCTGGTCCTCCTCCGTTTCTGACAAAAACATACGACATCGTCGACGACCCTTCCACCAATCACATAGTTTCGTGGAGCAGAGGCAATAATAGCTTCGTTGTCTGGGATCCACAGTCTTTTTCCATGAGCCTTCTTCCCAGATTCTTCAAGCATAACAACTTCTCTAGTTTTGTCAGGCAGCTTAACACATATGGATTTAGAAAGGTTGATCCAGATAAGTGGGAATTTGCCAATGAAGGGTTTCTCAGAGGACAAAGGCATCTTCTGAAGAACATTAGGAGAAGGAAAACACCTCATCAGCATCAAGCTCTAGTACACCAATCTCTAGATGCATGCGTTGAAGTTGGAAGGTTCGGATTGGACGGAGAAATCAATCGTCTAAGACGCGACAAGCAAGTTCTAATGGTGGAGCTAGTGAAACTCAGACAGCAACAACAAAATACCAAAAGCTACCTTCAAGAAATGGAAGGTAGGCTCAAGAGAACCGAACAGAAGCAGCAACAGATGATTAACTTTTTGGCAAGAGCAATGCAGAATCCTAACTTTGTTCAGCAGTTAGTTCATAAAAAAGAATGGAAGAAGGAACTGGAAGATGCTTTTTCAAAGAAGAGAAGAAGGCCAATTGATCAAGGGCCTAGTGGTAGTAATGTTGATGTTGAGTTAGTAGGTGAATTAGAATGCTCAGATTTTGTTAAACTTGAACCTCAGGAATACAATGCTGCTGCTACCTCAGATCAGATATCATCAGAGTTAGAGGTTTCGGCGTCAGATTTGGATTTGATCAAGAAGTTAGAGGAAGAACGTAATGAGGCTGAACTTGAAGCTGGACTTGAAAATAGAGATAAAGAGATTGATGAATTGTTTTGGCAAGACTTGTTGAATGAGAATAATATTGAGGATGAGCTACGAGGTTTCGAGGAAGACGATGAGGAAGATGTGGATGTGTTGGCCGAACAACTTGGTTATTTGGCCTCTAGCCCTAAATGA 1062 0.4275 MNRVKEELPGASTMAPPQPLEGLHEAGPPPFLTKTYDIVDDPSTNHIVSWSRGNNSFVVWDPQSFSMSLLPRFFKHNNFSSFVRQLNTYGFRKVDPDKWEFANEGFLRGQRHLLKNIRRRKTPHQHQALVHQSLDACVEVGRFGLDGEINRLRRDKQVLMVELVKLRQQQQNTKSYLQEMEGRLKRTEQKQQQMINFLARAMQNPNFVQQLVHKKEWKKELEDAFSKKRRRPIDQGPSGSNVDVELVGELECSDFVKLEPQEYNAAATSDQISSELEVSASDLDLIKKLEEERNEAELEAGLENRDKEIDELFWQDLLNENNIEDELRGFEEDDEEDVDVLAEQLGYLASSPK 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1681 353 SMART hsfneu3 27 120 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere14g1681 353 MobiDBLite consensus disorder prediction 1 26 - -
Dere14g1681 353 FunFam Heat shock transcription factor 1 24 121 - -
Dere14g1681 353 SUPERFAMILY "Winged helix" DNA-binding domain 27 120 IPR036390 -
Dere14g1681 353 Coils Coil 149 190 - -
Dere14g1681 353 Coils Coil 279 306 - -
Dere14g1681 353 PRINTS Heat shock factor (HSF) domain signature 31 54 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere14g1681 353 PRINTS Heat shock factor (HSF) domain signature 82 94 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere14g1681 353 PRINTS Heat shock factor (HSF) domain signature 69 81 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere14g1681 353 Gene3D - 23 121 IPR036388 -
Dere14g1681 353 Pfam HSF-type DNA-binding 31 120 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere14g1681 353 ProSitePatterns HSF-type DNA-binding domain signature. 70 94 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere14g1681 353 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 17 260 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1681 Dere-ChrDere14 18765448 18767738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1681 12 351 HSF AT3G22830 55.676 8.94e-133 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Dere14g1681 HSF_DNA-bind 2.5e-32 CL0123