Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1660 ATGTCGCGAATCAAACAGAGCGACCACCTCGTAGGGTTTTGTGTGCTCTTTAGCTCTTGCGGCCGCTTGCAGCATCAGAGGAGAAGAAGAAACCCTCGGTACCTTCAAACTCTAGCCATGGCCGTCGGCAAGAACAAGAGGATTTCCAAGGGAAAGAAGGGAGGAAAGAAGAAGGCAGCCGATCCATTTGCCAAGAAGGATTGGTACGATATCAAGGCTCCTTCTGTCTTCCAAGTTAAAAATGTGGGCAAGACTCTCGTCACTCGTACTCAGGGTACCAAGATTGCTTCAGAAGGACTGAAGCACAGAGTGTTTGAGGTCTCATTGGCTGATCTTCAAGGTGATGAGGACCACGCATACAGGAAGATTCGGTTGAGAGCTGAGGATGTTCAAGGGAAGAATGTCCTTACAAATTTCTGGGGAATGGACTTCACAACTGACAAGTTGAGGTCATTGGTTCGCAAATGGCAAACTTTAATTGAAGCTCATGTTGATGTGAAGACCACTGACAATTACACTTTGAGGTTGTTCTGCATTGGGTTTACTAAGAGGCGCGGAAACCAGGTGAAGAGGACCTGTTATGCTCAATCAAGCCAGATCAGACAGATCCGCAGGAAGATGAGGGAGATCATGGTTAACCAGGCAACATCCTGTGATTTGAAAGAGTTGGTCCGCAAGTTCATTCCTGAGATGATTGGAAAGGAGATTGAGAAGGCTACATCTAGCATCTATCCTTTACAAAATGTGTTCATTCGCAAAGTTAAGATCTTGAAGGCTCCTAAGTTTGATCTTGGGAAACTAATGGAGGTTCATGGTGATTATTCAGAAGACGTTGGTGTGAAGGTAGATAGACCTGCCGATGAAACAATGGCTGAGGCTCCCGCTGAAGTCATCGGAGCTTGA 903 0.4618 MSRIKQSDHLVGFCVLFSSCGRLQHQRRRRNPRYLQTLAMAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFQVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQGDEDHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLFCIGFTKRRGNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADETMAEAPAEVIGA 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1660 300 Pfam Ribosomal S3Ae family 55 260 IPR001593 GO:0003735|GO:0005840|GO:0006412
Dere14g1660 300 PANTHER 40S RIBOSOMAL PROTEIN S3A 33 292 - -
Dere14g1660 300 SMART Ribosomal_S3Ae_2 54 260 IPR001593 GO:0003735|GO:0005840|GO:0006412
Dere14g1660 300 ProSitePatterns Ribosomal protein S3Ae signature. 100 112 IPR018281 GO:0003735|GO:0005840|GO:0006412
Dere14g1660 300 Hamap 40S ribosomal protein S1 [RPS3A]. 40 297 IPR027500 GO:0003735|GO:0005840|GO:0006412
Dere14g1660 300 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1660 Dere-ChrDere14 18434387 18437100 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1660 40 300 Cytoplasmic Ribosomal Protein Gene Family AT4G34670 87.023 3.17e-165 457