Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1659 ATGGACACACCAGAGAGGAACCAGATCGGCACTCCCATCTCCAAATATGAGGATTCACCTGTATTCAACTATATCAATAGTCTTTCTCCTATAAAGCCAGTTAAGTCTGTTCACAGTATTCAGACTTTTAACTCACTTAGCTTTTCATCCCCTCCATCTGTTTTCACATCACCCCATGTCAGCTGTCACAAGGAATCTAGATTTCTCAGGAGGCATAACCTTTTGGACACATCAAAGCCTAAGACTTTGTCTGAAGATGGGAACAAAACACGTTCAAGTGAAGAAGCTCTTGCAGATTCAACTCATGCATACCATAACTCAAGTGAGCTACAGGCAAATGCTGATCAAGGGATTCCAATGGGAGAGTCTTCAGTTGAGCCATCTAATGAGCACACAAACTTTCCAATTGAGCTACCACAAACCTTAAAATATGACTGTGGTAGCCCTGGTTGTGATCCTCCACCTTCCGGTGAAGAAACAAATTCTCTGCTGGATTTATCAAGTAAGGCAGCATCAGAGGTTGCCTATGTTGATGAAGCCTGTAAAAAGAATTCACCTGAGAGTGAAGTGCTTCTTCAGGGAATGTGTCAAATTGAACCAACCAATGAAGGCCCAGAATGTGATTGGGACAGTTTACTTTCAGATGCTGCTGATCTATTAATTTTTAACTCTCCAAATGAGAGAGAAGCTTTGAAGGGTCTAATGCAGAAATCATTTGACCCTACAGTGCGGCTTAGCAATTTTATGTCTCAGTTGCCACATACTACCATCAGTAATGCTGAAAAAATGCACATTGTTGATCCAATTGCTTCTGGTTCAGAACATGAAATTGAAGACCATCTTTCTAAACCAGGAGAAGCCTCTGACATTGATCAGGCACAGGACAATCTTGCCAACACTGCTGTGTCAGGTAGCAATCCAAATGATGCATTGAATAATGAGCTTGTTTCTATAACTCATCATGGCCTGCGGAGGCGCTGTCTAGACTTCGAGATGGTTGGAATGAGGAGGAAGAAGTCAGATGATGGTTTAAATAACAGTTCCAGTACATTACAATCTGATGAGAGCAATGTCCCTAATGATAAGCAGCTGCTTCCTGCAAAACGCAACGGTGATTCGCGGAGGTGCATTTTGCCTGGAATTGGTTTACACTTGAATGCTCTTGCAACTTTAAAAGATTACAAAAACATAAAAAATGAAAATGTGTCTTCTGGAAGACAACTCAGTCTGCCCAGCCCTGCTTCTGCCTTGCAACACTCTACAAGCCAAGAACATAATCTATCCTTGGTGTCTGCATCGGCTGAAAGAGATTCAGATCTTCCAGATAATGGGGTTCAGCCTGCTGATGATTGTTCCCAGCCATCATCAGGATATGTGGTTGATGAAGATCTCAATCAGAATAGCCCCAAAAAGAAAAAGCGTAAGGTGGAGCCAGCTGGAGAGAGTGAGTCCTGTAAGCGTTGTAATTGCAAGAAATCAAAGTGTTTGAAGCTTTATTGTGAGTGCTTTGCTGCTGGTGTCTACTGCATAGAACCCTGCTCATGTCAGGATTGCTTCAACAAACCTATTCATGAGGATACTGTTCTTGCAACTCGCAAGCAGATTGAGTCTCGTAATCCCCTAGCCTTTGCTCCTAAAGTCATCCGAAGTTCTGATTCTGTACCTGAAATTGGGGACGACCCCAACAAAACTCCAGCTTCGGCACGGCACAAAAGAGGATGTAACTGCAAGAAATCAAGCTGCTTAAAGAAATATTGTGAATGCTATCAGGGCGGTGTTGGTTGCTCTATTAGCTGTAGATGTGAAGGGTGCAAGAATGCATATGGTAGAAAGGATGGTTCTGCTCCTATAGGAATAGAAGCTGATCCAGAAGAAGAAACAGAACCATCTGAGAAGGCTGTGGTTGAAGATTCTTTACAAAAATCTGAGATTCAGAATAATGAAGAACTTCCAGATTCTGGTCTTCCCACAACACCATTACGGCTTTGCAGACCATTGCTTCCGCTGCCCTTTTCATCAAAGGGCAAACCACCAAGATCTTTTATTACTACCATACCGTCTTCTGGATTGTATGCCAGCCAAAAAATTGGGAAACCCAGCATCCTTCGGTCTCAACCCAAGTTCGAAAAGCAATTCAAAACTGTTTCAGATGATGAAATGCCAGAGGTTCTCAGGGGTGATGGCTCTCCTAGCATCAAGACATCATCTCCCAATAGCAAGAGGATCTCCTCTCCTAACTGTGACTTTGGATCATCTCCTAGTCGTAGAAGTGGCAGAAAGTTGATATTACAATCCATCCCTTCATTTCCTTCTCTCACTCATCACCTTTAG 2331 0.4281 MDTPERNQIGTPISKYEDSPVFNYINSLSPIKPVKSVHSIQTFNSLSFSSPPSVFTSPHVSCHKESRFLRRHNLLDTSKPKTLSEDGNKTRSSEEALADSTHAYHNSSELQANADQGIPMGESSVEPSNEHTNFPIELPQTLKYDCGSPGCDPPPSGEETNSLLDLSSKAASEVAYVDEACKKNSPESEVLLQGMCQIEPTNEGPECDWDSLLSDAADLLIFNSPNEREALKGLMQKSFDPTVRLSNFMSQLPHTTISNAEKMHIVDPIASGSEHEIEDHLSKPGEASDIDQAQDNLANTAVSGSNPNDALNNELVSITHHGLRRRCLDFEMVGMRRKKSDDGLNNSSSTLQSDESNVPNDKQLLPAKRNGDSRRCILPGIGLHLNALATLKDYKNIKNENVSSGRQLSLPSPASALQHSTSQEHNLSLVSASAERDSDLPDNGVQPADDCSQPSSGYVVDEDLNQNSPKKKKRKVEPAGESESCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKPIHEDTVLATRKQIESRNPLAFAPKVIRSSDSVPEIGDDPNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNAYGRKDGSAPIGIEADPEEETEPSEKAVVEDSLQKSEIQNNEELPDSGLPTTPLRLCRPLLPLPFSSKGKPPRSFITTIPSSGLYASQKIGKPSILRSQPKFEKQFKTVSDDEMPEVLRGDGSPSIKTSSPNSKRISSPNCDFGSSPSRRSGRKLILQSIPSFPSLTHHL 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1659 776 MobiDBLite consensus disorder prediction 404 433 - -
Dere14g1659 776 ProSiteProfiles CRC domain profile. 484 609 IPR005172 -
Dere14g1659 776 SMART CXC_2 483 524 IPR033467 -
Dere14g1659 776 SMART CXC_2 569 610 IPR033467 -
Dere14g1659 776 MobiDBLite consensus disorder prediction 715 757 - -
Dere14g1659 776 MobiDBLite consensus disorder prediction 338 368 - -
Dere14g1659 776 MobiDBLite consensus disorder prediction 729 757 - -
Dere14g1659 776 MobiDBLite consensus disorder prediction 344 360 - -
Dere14g1659 776 MobiDBLite consensus disorder prediction 637 657 - -
Dere14g1659 776 MobiDBLite consensus disorder prediction 639 653 - -
Dere14g1659 776 MobiDBLite consensus disorder prediction 144 163 - -
Dere14g1659 776 MobiDBLite consensus disorder prediction 71 97 - -
Dere14g1659 776 MobiDBLite consensus disorder prediction 404 476 - -
Dere14g1659 776 MobiDBLite consensus disorder prediction 448 463 - -
Dere14g1659 776 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 773 IPR044522 GO:0003700
Dere14g1659 776 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 572 607 IPR005172 -
Dere14g1659 776 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 486 521 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1659 Dere-ChrDere14 18410390 18416085 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1659 17 773 CPP Transcription Factor Family AT4G14770 45.537 7.68e-171 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Dere14g1659 TCR 3.1e-11 No_clan