Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1657 ATGGATATGGAAGTTGGAGAGGCAGGTGTTAGGACACAGAAGATGGATGTGGAAGCAGAAGGAGCTCTGAATTCGAAGATGAAGGGTAACGGAAACGTTAGCAGTAAAGATATGATTTTCAGGGCTGATAAAATTGATCTCAAAAGTTTGGATGCCCAGCTTGAAAAGCACTTAAGCAGGGTTTGGTCCAGGGACTTTGAGTCCAAAAGGCCTAAAGAAGAGTGGGAGATTGATTTGGCCAAATTGAATTTACGATACATTGTAGCGCATGGGGCCTATGGTACTGTTTACAGAGGCACTTATGATAACCAAGATGTTGCAGTGAAAGTGTTGGACTGGGGTGAGGATGGTGTCGCCACAGCAGCTGAAACTGCTGCTTTACGGGCATCATTTCGGCAGGAGGTTGCTGTTTGGCACAAACTTGACCATCCTAATGTCACAAAATTTGTTGGAGCTTCAATGGGAACTTCAAATCTTAAGATTCCCACAAAGAACTCTTCAACTGATGGTCAAAGTGCCCTTCCTTCTAGGGCATGTTGTGTTGTTGTCGAGTATATTCCCTGTGGGACACTGAAACAATTCTTGTTCAAAAATAGGCATAAGAAACTTGCATACAAAGTTGTGATCCAGCTGGCTTTAGATCTCTCAAGGGGGCTTAGCTATCTACATTCAAAGAAGATTGTACATCGTGATGTCAAAACAGAGAATATGTTGCTAGACACCGGAGGAAACTTGAAAATAGCTGATTTTGGAGTTGCACGTGTTGAAGCACTAAATCCCAGTGACATGACTGGTGAAACTGGAACCCTTGGATATATGGCACCAGAGGTTTTGGACGGTAAACCTTACAATAGAAGATGTGATGTCTACAGCTTCGGCATTTGCTTGTGGGAAATTTATTGCTGCGATATGCCTTATCCAGATCTTAGCTTTGCTGATGTATCATCTGCAGTTGTCCGTCAGAATTTACGACCTGAAATCCCACGATGTTGTCCAAGTCCTTTGGCCAATATCATGAGGAAGTGCTGGGATGGGAATCCAGACAAGCGTCTCGAAATGGCACAGGTAGTGAGTATGTTGGAAGCCATAGATACAAGCAAAGGAGGAGGAATGATACCAGAAGATGTGACTCCTCTGTGTTTCTGTTTTGCTCCCTCCCGTGGTCCCTAA 1170 0.4393 MDMEVGEAGVRTQKMDVEAEGALNSKMKGNGNVSSKDMIFRADKIDLKSLDAQLEKHLSRVWSRDFESKRPKEEWEIDLAKLNLRYIVAHGAYGTVYRGTYDNQDVAVKVLDWGEDGVATAAETAALRASFRQEVAVWHKLDHPNVTKFVGASMGTSNLKIPTKNSSTDGQSALPSRACCVVVEYIPCGTLKQFLFKNRHKKLAYKVVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDTGGNLKIADFGVARVEALNPSDMTGETGTLGYMAPEVLDGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSPLANIMRKCWDGNPDKRLEMAQVVSMLEAIDTSKGGGMIPEDVTPLCFCFAPSRGP 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1657 389 Gene3D Transferase(Phosphotransferase) domain 1 188 370 - -
Dere14g1657 389 CDD STKc_MAP3K-like 88 360 - -
Dere14g1657 389 PRINTS Tyrosine kinase catalytic domain signature 287 309 IPR001245 GO:0004672|GO:0006468
Dere14g1657 389 PRINTS Tyrosine kinase catalytic domain signature 331 353 IPR001245 GO:0004672|GO:0006468
Dere14g1657 389 PRINTS Tyrosine kinase catalytic domain signature 183 196 IPR001245 GO:0004672|GO:0006468
Dere14g1657 389 PRINTS Tyrosine kinase catalytic domain signature 221 239 IPR001245 GO:0004672|GO:0006468
Dere14g1657 389 Pfam Protein tyrosine and serine/threonine kinase 85 360 IPR001245 GO:0004672|GO:0006468
Dere14g1657 389 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 60 363 - -
Dere14g1657 389 FunFam Kinase suppressor of Ras 1 71 166 - -
Dere14g1657 389 Gene3D Phosphorylase Kinase; domain 1 71 165 - -
Dere14g1657 389 FunFam Serine/threonine-protein kinase HT1 186 371 - -
Dere14g1657 389 ProSiteProfiles Protein kinase domain profile. 82 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1657 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Dere14g1657 389 SMART serkin_6 82 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1657 389 SUPERFAMILY Protein kinase-like (PK-like) 62 360 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1657 Dere-ChrDere14 18386310 18388936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1657 29 389 MAP Kinase Kinase Kinase AT3G22750 80.110 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Dere14g1657 PK_Tyr_Ser-Thr 2.9e-57 CL0016