Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1629 ATGGAACCGGGCATGAGATCAGCTGGCCCACCTGGGGTTGTAGTGAAGAACAGGAACTCTTCGGGCTGTTTAATTGTTAGAAAGAAAGATGGGTTGGGCGGTGGATTTGGTTCTTCGAGCAGCTCTAGGAAGCTGTATGAATCAAAGAAGGTTAGGAAAAGACCTATTATGTCTATGAGTGATTCAGAATCAAGCGATGACTTGCTGATGCCTCCAAGTAGAAGGCTTGGTCCTGAGACTATTCGGGTCTGTAATGGTTTGACTGCTTCTGAGCAGGGCATGGTGGAAGGGAGTAAAATTGGTCGAAAGAGGGATAGAATGGAGCAAATCAGGCGTAATGAAGATGCTATGATCGAGAAGAATGGCTTTGATCAGAGAGAAAGAAAGCGGAATAAAATGGACGTGTTTGATTTTGATGAATATGATGGCATGGATGTGGAGAAGATGCGAAGGAGGTATTTTGATGATGATAATGGAGTTAGTTCTGGAGGACGAAGGTTTATGGGATCAATGCATGCTGCTAGAAGTGGCATTGAGAGAGAATTTGAAACTGGGTCAAGCAGACACATTTTTGATACTAGAAAGAATTCCTATTATGATAGGGCTAGTGGATTGTATCTGGAAGATAATGTTGACCACCGAAGTTTCAAATTGAATAGGGATGGTGCTCAGGTGCCTCTACCCTTGCTGAAAGAGAAGTTTAAATCAGATGAATCCATCAGGGTTCAGGGGAAAAATGGTGTTCTGAAGGTAATGGTTAATAAGAAGAGGGTGGGTGGCCCATTAGAACACTATGATCGCCGCAAACCTATCGAAAGTAGACAGAGTTTAAGGACTGAAGCCAGTGCCAAGAAGGACATTCTGGTACATCCTTCATCATACCTGGAAACAAAAGTTGTTGAGAAGCCACGTTTAGTTGTTAGGCCAGAGAAAAAGCAGACAGCATCAAGAAAATCCTTGTCAAGTAAGGACAGTAAGGGCAATGATTGGGATTCAGAAGACAGTGACAAATCATTGAATCTGAGAGTAGAAAATACTAAAGCTCGCAAGCCTGTGAAAAAGGAAGGTTCTGAGGATGAACAGACTCCTTTGCATGAAAAGCTCCCAACTACAGTCATGAAAGAAGGAAAAGTAAGGCGTGGTAGTGGCACAGAAAAACAGAAACTGCGAGAAAAAATAAGGGAAATGCTTCTGAGTGCAGGTTGGACAATAGATTATCGGCCTCGAAGGAACAGAGACTATCTGGATGCAGTTTACATTAATCCAGGAGGTACTGCCTATTGGTCGATCATTAAAGCCTATGATGCTCTTCAAAAGCAATTGAATGATGATCATGATGAGGCCAAGCCCACGGGCAATGGTTCTTCATTTGCTCGAATCTCAGATGAGGTTCTGAGTCAATTAACAAGAAAGACTAGGAAAAAGATGGAGAAAGAATTGAAGAAGCAAAGAGAAGGTAGTGAGAGTGATAGTGAAAAAGAACCTGATCTTAAAAGATCTGCCAGCAACAAACATGATATAAATAGCATGGATAGTGATAGCAACGAAGAGAAATTAAGCTCTTTTATAAAGCAGGGAAGTAAATCATTGAAAAATAAGATGATAGAAAATGTTGTTGCCAGTGTTAGCTTTAAATCCCAGAAATCTACCCATCACTTACGTGATGGAACTGAAAAGTCATTGTCTGGATGTGAGCCTCATCTGCCACATGGGAGGAAAAGTAGAAAACATGGAAGATGTACTCTGTTAGTTCGTAGTTCTAATAAGGGATTAAATTCAGAATCTGATGGCTTTGTTCCACATACTGGCAAAAGAACTGTTCTTTCATGGTTGATCGACTCTGGGACAGTTCAGTTGAGCCAAAAGGTTCAGTACCGTAGACGAAAACGAGTAACGCTGGAGGGATGGATCACAAGAGATGGCATTCATTGTGGCTGCTGCAGTAAAATCCTCACAGTTTCCAAGTTTGAGATTCATGCTGGAAGCAAACTGCGCCAGCCATTTCAAAACATATATTTGGATTCAGGAGTTTCTCTTCTACAGTGCCAAATAGATGCATGGAATAGACAAGAGAATTCTGAGAAAATTATTTTTCACTCAGTGGATATTGATGGTGATGATCCAAATGATGACACTTGTGGCATATGTGGAGATGGTGGGGATTTAATCTGTTGTGATGGTTGTCCATCAACATTTCATCAGAGCTGCTTGGATATACAGATGCTTCCTGCTGGCGAATGGCATTGTCCAAATTGCACCTGCAAATTTTGTGGTATAGCCAGTGGGACTGTTGAAAATGAAGATGATGCTACTATATGTGCTCTACTTACTTGCAACTTGTGTGAGAAAAAATACCATGAATCTTGTACTAAGGAGATGGATGCCCTTCCTATCAAATCTAATATGCCAAGCTTTTCTTTTTGTGGAAAAGAGTGCAAAGAGCTTTTTGAGCACTTGAAGAAGTACTTAGGTACCAAGCATGAATTAGAAGCAGGCTTTTCATGGTCTCTTATTCATAGAGCAGATGAAGACTCAGAGGCAGCTAGTAGAGGAATTATTCAAAGGGTGGAATGCAACTCCAAGTTAGCTGTTGCACTGACTGTCATGGATGAATGCTTTTTACCCGTTGTTGACCGGAGGAGTGGGATCAATTTAATTCATAATGTTCTATATAATAGTGGGTCAAACTTCAATAGGTTGAATTATAGTGGCTTTTACACTGCTATCTTGGAGAGGGGTGATGAAATAATTTCGGCAGCATCTATCAGGTTCCATGGGACTAGGTTAGTGGAGATGCCATTTATTGGAACTCGCCATATATATAGGCGCCAGGGAATGTGCCGTCGGCTTTTTTCTGCTATTGAATCGGCCCTCTGTTCTATGAAGGTTGAGAAAATGGTTATTCCCGCAATTGCTGAACTCATGCAAACATGGACAGCAATTTTTGGCTTCACACCTCTTGAGGAATCACTCAGGCAAGAAATGAGGTCATTGAATATGCTGGTCTTCCCTGGTATAGATATGTTACAGAAGTTGCTAGTGGAGCAAGGAAAATTTAATGGGAACACAACTGCCCCAGGTGCCGAGAAAATGGAAAATGGAGGCGAAGTTTATATCAGGCCTAAATTGGCTAATAGGTCATTTGCTGATTCTCCAATCCAGCAAGAATTTGATGGAAGCGATAATGCTGGTTTAAATCCTGCCAGTGACATGAACGATGAATGCAGTGATGCAGTTTTGTCTGACAAGGCTGAATGTTCCAAATCTCATTCTGAGGATGGGCTATCTGACTCAGCTTTGGATAAATTTTCTTCTCCCTCCGGGACAGGTCATGTTGCACTGGAGATGGAAGGTAAAGTAGTGGTGGCTTCTCCTGTAAATAATAATTTGCATATATCTATCAAATGTCAGGGCAATTCTCTAAATGACACTTCTATGGCTATTCATCCATTAGATGCTCTTGATTGCCTTGAAACTCAAACTCTGGTTCAGGGAACTGCTACTTCTGATCCTAATTCAACAAAAATCCTCGCTGAACATGTTTCTGAAAGGAAATGTCGCTTGCACACTGCTGTAAGTGGTAATTCATCTGAGCTTGAGGTGAACCAGGTGTTGGATTCTCAAGTGATGGATGATACTGTATCTTTTAGAGAGGCTGATATGGATAATTCTGAAGGGTTTCATGAAGCTGTGTCTTCAGGGGGTTTATCTGAAGAGAATATTACGAAGCAGAACACTGAAAATACAAATGTGTCTGTTTCTGTACTTAATCATGCTGATGAGAAAGAAGTTGTTTGTGAAGGAGAAAGAATTATATATGTTGGCACAGAAGTTACTTCAAAAGAAATGCGACCATATGAAAGTGGCATAAATGCATCCAGTGATAGTTCTGAGACTGATTCGGAATAG 3909 0.4111 MEPGMRSAGPPGVVVKNRNSSGCLIVRKKDGLGGGFGSSSSSRKLYESKKVRKRPIMSMSDSESSDDLLMPPSRRLGPETIRVCNGLTASEQGMVEGSKIGRKRDRMEQIRRNEDAMIEKNGFDQRERKRNKMDVFDFDEYDGMDVEKMRRRYFDDDNGVSSGGRRFMGSMHAARSGIEREFETGSSRHIFDTRKNSYYDRASGLYLEDNVDHRSFKLNRDGAQVPLPLLKEKFKSDESIRVQGKNGVLKVMVNKKRVGGPLEHYDRRKPIESRQSLRTEASAKKDILVHPSSYLETKVVEKPRLVVRPEKKQTASRKSLSSKDSKGNDWDSEDSDKSLNLRVENTKARKPVKKEGSEDEQTPLHEKLPTTVMKEGKVRRGSGTEKQKLREKIREMLLSAGWTIDYRPRRNRDYLDAVYINPGGTAYWSIIKAYDALQKQLNDDHDEAKPTGNGSSFARISDEVLSQLTRKTRKKMEKELKKQREGSESDSEKEPDLKRSASNKHDINSMDSDSNEEKLSSFIKQGSKSLKNKMIENVVASVSFKSQKSTHHLRDGTEKSLSGCEPHLPHGRKSRKHGRCTLLVRSSNKGLNSESDGFVPHTGKRTVLSWLIDSGTVQLSQKVQYRRRKRVTLEGWITRDGIHCGCCSKILTVSKFEIHAGSKLRQPFQNIYLDSGVSLLQCQIDAWNRQENSEKIIFHSVDIDGDDPNDDTCGICGDGGDLICCDGCPSTFHQSCLDIQMLPAGEWHCPNCTCKFCGIASGTVENEDDATICALLTCNLCEKKYHESCTKEMDALPIKSNMPSFSFCGKECKELFEHLKKYLGTKHELEAGFSWSLIHRADEDSEAASRGIIQRVECNSKLAVALTVMDECFLPVVDRRSGINLIHNVLYNSGSNFNRLNYSGFYTAILERGDEIISAASIRFHGTRLVEMPFIGTRHIYRRQGMCRRLFSAIESALCSMKVEKMVIPAIAELMQTWTAIFGFTPLEESLRQEMRSLNMLVFPGIDMLQKLLVEQGKFNGNTTAPGAEKMENGGEVYIRPKLANRSFADSPIQQEFDGSDNAGLNPASDMNDECSDAVLSDKAECSKSHSEDGLSDSALDKFSSPSGTGHVALEMEGKVVVASPVNNNLHISIKCQGNSLNDTSMAIHPLDALDCLETQTLVQGTATSDPNSTKILAEHVSERKCRLHTAVSGNSSELEVNQVLDSQVMDDTVSFREADMDNSEGFHEAVSSGGLSEENITKQNTENTNVSVSVLNHADEKEVVCEGERIIYVGTEVTSKEMRPYESGINASSDSSETDSE 1302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1629 1302 Pfam PHD-finger 713 755 IPR019787 -
Dere14g1629 1302 PANTHER PHD FINGER PROTEIN 12 361 1255 IPR042163 GO:0003714|GO:0045892
Dere14g1629 1302 MobiDBLite consensus disorder prediction 1 20 - -
Dere14g1629 1302 MobiDBLite consensus disorder prediction 548 569 - -
Dere14g1629 1302 MobiDBLite consensus disorder prediction 444 520 - -
Dere14g1629 1302 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 701 834 IPR013083 -
Dere14g1629 1302 MobiDBLite consensus disorder prediction 1086 1106 - -
Dere14g1629 1302 SMART PHD_3 712 753 IPR001965 -
Dere14g1629 1302 SMART PHD_3 754 813 IPR001965 -
Dere14g1629 1302 MobiDBLite consensus disorder prediction 466 513 - -
Dere14g1629 1302 MobiDBLite consensus disorder prediction 1283 1302 - -
Dere14g1629 1302 MobiDBLite consensus disorder prediction 26 77 - -
Dere14g1629 1302 CDD PHD2_CHD_II 713 752 - -
Dere14g1629 1302 MobiDBLite consensus disorder prediction 1226 1245 - -
Dere14g1629 1302 SUPERFAMILY FYVE/PHD zinc finger 699 758 IPR011011 -
Dere14g1629 1302 MobiDBLite consensus disorder prediction 306 387 - -
Dere14g1629 1302 MobiDBLite consensus disorder prediction 1286 1302 - -
Dere14g1629 1302 ProSiteProfiles Zinc finger PHD-type profile. 710 755 IPR019787 -
Dere14g1629 1302 MobiDBLite consensus disorder prediction 1053 1074 - -
Dere14g1629 1302 MobiDBLite consensus disorder prediction 1053 1069 - -
Dere14g1629 1302 Pfam Tify domain binding domain 635 685 IPR032308 -
Dere14g1629 1302 MobiDBLite consensus disorder prediction 260 284 - -
Dere14g1629 1302 MobiDBLite consensus disorder prediction 545 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1629 Dere-ChrDere14 18005435 18013609 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1629 4 1014 PHD Transcription Factor Family AT4G14920 51.512 0.0 946
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Dere14g1629 TDBD 1.1e-21 No_clan