Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1619 ATGTTAGCGAATCACTTCCAAAACGGTATTGAAACGGCGAAGCTGGTTTGGTCGCGAATTCCGAACTCGGACGAACCCCAGTTCCCCGACGACGCCGTTGGCTTGTTGAAGAAGAGTGATGGAAGCGGCGTTGAGAGCCTTGACTATGAAGTCATCGAGAATTTTGCTTATCGGGAAGAGCAGGCGCTAAGAGGGAAGCTGTATGTGGGCTATTTGCTGGTGGTGAAATGGTTCTTTGCCTTGCTCATAGGCATTGGTACTGGACTTGCTGCTGTTTTCATCAATATTTCTGTTGAAAACTTCGCTGGCTGGAAGTTCTCATTGACATTTAATATAATTCAGAAATCATACGTGGCTGGCTTTATTGTATATGTCCTAATCAACTTGGTTTTGGTCTATTCCTCTGTATATATCATCACACAATTTGCACCAGCAGCAGCTGGATCTGGTATTCCTGAAATTAAGGGTTATTTGAACGGAATTGATATTCATGGCATCCTTCTTTTCCGAACCTTGATCGGAAAGATATTTGGAAGCATTGGTTCAGTGGGAGGTGGCCTTGCTTTGGGCAAAGAGGGTCCTCTTGTGCATATTGGTGCTTGTATTGCTTCTTTGCTTGGACAAGGTGGGTCTACCAAGTATCATCTAAATTCAAGGTGGTTTCAAGTATTCAAAAGCGATCGGGATAGGCGAGATCTTGTAACTTGTGGGTGCGCAGCTGGAGTAGCTGCTGCATTTAGAGCTCCAGTTGGTGGTGTATTGTTTGCATTGGAAGAGGTAACATCTTGGTGGAGAAGTCAACTGATGTGGCGGGTCTTCTTCACTTCTGCTGTTGTGGCTGTTGCGGTGCGTACTGCAATGGGTTGGTGTAAAAATGGAAACTGTGGACATTTTGGCTCAGGTGGATTCATAATATGGGATATATCAGGTGGTCAAGAGGATTATTCCTTTGCTGAATTACTGCCTATGGCTGTTATTGGGGTTATTGGAGGTCTGCTAGGAGCATTATTCAACCAGCTTACTCTCTATGTAAGTTCTTGGCGTCGAAATCAACTGCACAAGAAAGGGGGCCGAGTCAAGATTGTTGAAGCATGCCTTGTTTCCTTGTTAACTTCAGTTATTTCATTTGGCTTGCCGCTTCTAAGAAAATGTAGTCCATGCCCAGAATCTGATCCTGATTCTGTAATTGAATGTCCACGACCACCTGGAATGTATGGGAATTATGTAAATTTCTTCTGTAGTAAAGACAAGGAATACAATGATCTTGCCACAATTTTTTTCAATACACAGGATGATGCCATAAGAAATTTGTTCAGTGCAAAAACAATACACGAGTACAGTGCCCAAAGTTTACTAACCTTTTTGGTTATGTTTTATGCTCTAGCAGTTGTGACATATGGTATTGCAGTTCCAGCTGGTCAATTTGTTCCTGGAATTATGATAGGATCGACATATGGACGTCTTGTTGGGATGGCTGTTGTGAAATATTACACAAAGCTCAAAATTGAAGAGGGAACGTATGCTCTGCTGGGAGCTGCATCTTTTCTTGGAGGTTCAATGCGGATGACGGTTTCTCTCTGTGTCATTATGGTTGAAATAACAAATAACCTAAAACTTTTACCTCTTATTATGCTTGTTCTTCTTATATCTAAGGCTGTTGGTGATGCTTTTAATGAGGGCTTATATGAAGAGCAGGCACGACTAAGGAGCATTCCATTACTGGGATCAAGCCCTAAATATGAAATGCGGAATATGACAGCAAAGGAGGCCTGTGGGAGCAGCAGGGTGGTTTCCTTCCCACGTGTTGTTAAGGTTGCAGATGTAGTTTCCATTTTGCGGAGCAACGAACACAATGGTTTTCCTGTGATTGATCACACAAGAAGTGGAGAACCACTTGTTATTGGATTAGTGCTTAGGAGTCATCTTTTGGCAATTCTACAGTCAAAGGTTCATTTCCAGCATAATCCTTTACCTAGTAATCCCAGAGGCGTGGCCAGGCCAATAAGGTACGAATCTGACGAATTTACAAAGCCTGTTTCTTGTAATGGAATCTGTATAGATGATATACATCTGAGTTCAGAGGACTTAGAAATGTACATAGATCTTGCCCGATTTTTGAATCCATCACCATATATTGTACCTGAAGATATGTCTTTGACAAAGGTGTACAATCTTTTCCGTCAACTAGGTTTGAGGCATTTATTTGTTGTTCCACACCCGTCTCATGTGCTTGGTTTGATAACCAGGAAAGATCTGTTGATTGAGGATACGGAAAATGTGAACACAGTAGAGCTCCAGTCAACTAGTGTAAGGATTCCACATTGTGATGAAATCGTGATGGTGAGGAATACAGATGCTGAGCGTCCTTTGCTAAATGGTCTTCTGGCTTAG 2391 0.4233 MLANHFQNGIETAKLVWSRIPNSDEPQFPDDAVGLLKKSDGSGVESLDYEVIENFAYREEQALRGKLYVGYLLVVKWFFALLIGIGTGLAAVFINISVENFAGWKFSLTFNIIQKSYVAGFIVYVLINLVLVYSSVYIITQFAPAAAGSGIPEIKGYLNGIDIHGILLFRTLIGKIFGSIGSVGGGLALGKEGPLVHIGACIASLLGQGGSTKYHLNSRWFQVFKSDRDRRDLVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAVVAVAVRTAMGWCKNGNCGHFGSGGFIIWDISGGQEDYSFAELLPMAVIGVIGGLLGALFNQLTLYVSSWRRNQLHKKGGRVKIVEACLVSLLTSVISFGLPLLRKCSPCPESDPDSVIECPRPPGMYGNYVNFFCSKDKEYNDLATIFFNTQDDAIRNLFSAKTIHEYSAQSLLTFLVMFYALAVVTYGIAVPAGQFVPGIMIGSTYGRLVGMAVVKYYTKLKIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKLLPLIMLVLLISKAVGDAFNEGLYEEQARLRSIPLLGSSPKYEMRNMTAKEACGSSRVVSFPRVVKVADVVSILRSNEHNGFPVIDHTRSGEPLVIGLVLRSHLLAILQSKVHFQHNPLPSNPRGVARPIRYESDEFTKPVSCNGICIDDIHLSSEDLEMYIDLARFLNPSPYIVPEDMSLTKVYNLFRQLGLRHLFVVPHPSHVLGLITRKDLLIEDTENVNTVELQSTSVRIPHCDEIVMVRNTDAERPLLNGLLA 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1619 796 CDD ClC_6_like 45 574 - -
Dere14g1619 796 FunFam Chloride channel protein 698 789 - -
Dere14g1619 796 Pfam CBS domain 705 753 IPR000644 -
Dere14g1619 796 Pfam CBS domain 595 646 IPR000644 -
Dere14g1619 796 Gene3D - 592 759 IPR046342 -
Dere14g1619 796 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 37 758 - -
Dere14g1619 796 PRINTS Plant CLC chloride channel signature 422 438 IPR002251 GO:0005247|GO:0006821|GO:0016020
Dere14g1619 796 PRINTS Plant CLC chloride channel signature 50 58 IPR002251 GO:0005247|GO:0006821|GO:0016020
Dere14g1619 796 PRINTS Plant CLC chloride channel signature 274 284 IPR002251 GO:0005247|GO:0006821|GO:0016020
Dere14g1619 796 PRINTS Plant CLC chloride channel signature 292 299 IPR002251 GO:0005247|GO:0006821|GO:0016020
Dere14g1619 796 PRINTS Plant CLC chloride channel signature 260 268 IPR002251 GO:0005247|GO:0006821|GO:0016020
Dere14g1619 796 SMART cbs_1 595 647 IPR000644 -
Dere14g1619 796 SMART cbs_1 709 757 IPR000644 -
Dere14g1619 796 PRINTS Chloride channel signature 561 575 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dere14g1619 796 PRINTS Chloride channel signature 505 521 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dere14g1619 796 PRINTS Chloride channel signature 144 161 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dere14g1619 796 PRINTS Chloride channel signature 239 258 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dere14g1619 796 PRINTS Chloride channel signature 470 490 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dere14g1619 796 PRINTS Chloride channel signature 175 194 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dere14g1619 796 PRINTS Chloride channel signature 523 542 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dere14g1619 796 SUPERFAMILY CBS-domain pair 579 753 IPR046342 -
Dere14g1619 796 SUPERFAMILY Clc chloride channel 54 575 IPR014743 -
Dere14g1619 796 Pfam Voltage gated chloride channel 134 554 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Dere14g1619 796 FunFam Chloride channel ClC3 68 385 - -
Dere14g1619 796 CDD CBS_pair_voltage-gated_CLC_euk_bac 593 753 - -
Dere14g1619 796 Gene3D Clc chloride channel 70 575 - -
Dere14g1619 796 ProSiteProfiles CBS domain profile. 706 763 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1619 Dere-ChrDere14 17808341 17819335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1619 1 771 Ion Channels AT5G26240 82.642 0.0 1224