Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1594 ATGAATAGTATCAAGTCTGCAACCTTCAAGGTCGAAGCCCTTAACTTCAGTGCCTTTGGAATCAACTTCGAGAACGAGGCACCATCACAGAACCAATCAGTGGCTGCATTTGTAGCAACAGATAAAGTGGCACTCTATCACTGTGCATTCTATAGCTCTCACAATACTCTCTTTGATTATAAAGGAAGACATTATTATGATTCTTGCTACATTCAAGGAAGGGCCAGTCTCTCTGCCACCATTGTCCCTGAAGGCTGGGCTCACTGGAGCTATGCTGGTAGCCCAGATAATTTATTCCATGCCGAGTACAAGTGCTTTGGACCTGGATCCAACATCACAGCTCGTGTTCCATGGGCGAAGCAACTCACTAACAAAGAAGCTGCTCCTTTCATCTCTGTTGATTTCATTGATGGCAAAGAATGGCTTCCTGTGTGGCTCTAA 441 0.449 MNSIKSATFKVEALNFSAFGINFENEAPSQNQSVAAFVATDKVALYHCAFYSSHNTLFDYKGRHYYDSCYIQGRASLSATIVPEGWAHWSYAGSPDNLFHAEYKCFGPGSNITARVPWAKQLTNKEAAPFISVDFIDGKEWLPVWL 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1594 146 Gene3D - 75 145 IPR012334 -
Dere14g1594 146 Gene3D - 1 74 IPR012334 -
Dere14g1594 146 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 4 74 - -
Dere14g1594 146 Pfam Pectinesterase 4 74 IPR000070 GO:0030599|GO:0042545
Dere14g1594 146 Pfam Pectinesterase 76 138 IPR000070 GO:0030599|GO:0042545
Dere14g1594 146 SUPERFAMILY Pectin lyase-like 4 144 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1594 Dere-ChrDere14 17511095 17513109 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1594 3 73 Carbohydrate Esterase AT5G04960 31.944 1.13e-06 45.1