Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1586 ATGAATCCGCTCTCTCTGTGTTGGAAGCCATTCGGGCGCAGTGCTGACAAATTCGACTCTATTGGGGGTGGTGGGGCAGGCGGGCGAGAAGGCAAAGACGGCTTGCTTTGGTTTCGGGACATCGGAAAGTATGGCTCCGGCGATTTTTCGATGGCGGTGGTCCAGGCAAACCAGGTTCTCGAAGACCAGAGCCAGATCGAGTCTGGCCCTCTGGGCACCTTTGTAGGTGTATACGATGGTCATGGAGGACCCGACGCAGCTCGATACGTTTGCGATCACTTGTTTCGGCACTTCCAAGAAATATCAGCTCAGTCACGGGGAGATGTGACTGCGGAGACCGTTCATAGAGCATTTCTTCGAACAGAAGAGGGCTTCACTTCTCTTGTGTCAGAATTATGGAGTACACGACCTCAGGTTGCAACTGCTGGGTCTTGTTGTCTAGTTGGAGTGATATACCAGCAGACCCTCTTTGTGGCAAATGTGGGAGATTCTCGTGTTGTATTGGGTAAGAAAGTTGGCGACACTGGAGGTATGGCTGCAATTCAGCTTTCTACAGAACATAATGCAAATCTTGAGGCCATTAGGCAGGAACTTAAAGAATTACATCCGCACGATCCCCAAATTGTTGTCCTCAAACATGGAGTGTGGAGAGTAAAAGGCATTATTCAGGTTTCGAGGTCAATAGGTGACGTATATATGAAACACACACAGTATAACCGGGAACCAATTAATGCAAAATTCAGACTTCCTGAGCCAATGAATATGCCTATCTTGACTGCTAATCCAACTATTTTATCTCATCCTCTCCAACCCAACGATTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAGCACTTGAGTAATGAAAAAGCTGTGGATATTGTCCACAGCAATCCGCGTGCGGGTAGTGCCAAGAGACTTGTCAAGGCTGCCCTCCATGAAGCAGCAAGGAAACGAGAAATGAGATATTCAGACCTCCGTAAGATTGGCAAGAAGGTTCGACGCCATTTTCACGACGATATAACTGTTATTGTTTTATTCTTAAACCACGATCTTATATCCAGAGGCACAGTGATAGATCCTCCACTTTCAATTCGAAGTGCTCTTGATCACTGA 1119 0.4683 MNPLSLCWKPFGRSADKFDSIGGGGAGGREGKDGLLWFRDIGKYGSGDFSMAVVQANQVLEDQSQIESGPLGTFVGVYDGHGGPDAARYVCDHLFRHFQEISAQSRGDVTAETVHRAFLRTEEGFTSLVSELWSTRPQVATAGSCCLVGVIYQQTLFVANVGDSRVVLGKKVGDTGGMAAIQLSTEHNANLEAIRQELKELHPHDPQIVVLKHGVWRVKGIIQVSRSIGDVYMKHTQYNREPINAKFRLPEPMNMPILTANPTILSHPLQPNDSFLIFASDGLWEHLSNEKAVDIVHSNPRAGSAKRLVKAALHEAARKREMRYSDLRKIGKKVRRHFHDDITVIVLFLNHDLISRGTVIDPPLSIRSALDH 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1586 372 CDD PP2Cc 49 349 IPR001932 -
Dere14g1586 372 Gene3D - 40 357 IPR036457 -
Dere14g1586 372 SUPERFAMILY PP2C-like 58 350 IPR036457 -
Dere14g1586 372 ProSitePatterns PPM-type phosphatase domain signature. 74 82 IPR000222 GO:0043169
Dere14g1586 372 SMART PP2C_4 35 347 IPR001932 -
Dere14g1586 372 ProSiteProfiles PPM-type phosphatase domain profile. 48 349 IPR001932 -
Dere14g1586 372 PANTHER PROTEIN PHOSPHATASE 46 347 IPR015655 GO:0004722|GO:0006470
Dere14g1586 372 Pfam Protein phosphatase 2C 72 319 IPR001932 -
Dere14g1586 372 FunFam Probable protein phosphatase 2C 42 39 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1586 Dere-ChrDere14 17437379 17441339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1586 1 302 PP2C-type Phosphatase Gene Family AT3G17090 71.661 1.70e-158 446