Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1583 ATGGCGTCATCTCTGATCTCGAATCCGGTAACAAACACCGATCGTTCACGCGACGCCTGCAAGAGGAAGAAGAAGAAGAAAGCGGCTCTGCTTAAGCACCACCAAGAAGATCAGATTCAGACCCACGCCAGATGGAAATCCCAGGCTCAGCAACAAATCTACTCCTCCAAGCTCCATCAAGCCTTGGCTCGAGTCAACCTCGGCTCTTCCGGCTCCGACGGTGCGTCTCGCCGAGGGAAGGCCGTGCGCGAAGCTGCCGATAGGGTTCTGGCTGTCACTGCCAAGGGGAGGACTCGGTGGAGCCGAGCAATTCTCGCCAGCCGGCTGAAGCTGAAGTTCAGGAAGCACAGGAAGCAGAGGATACCGACGGCGGCGGCGGCGACCACCGGAATCAGCCGGTCGAGGAAGCCCCGAGTGAGCGTTTATCGGCTGAAGGGGAAGAGTTTACCGGCTGTGCAGAGGAGAGTGAGGTTCCTCGGCCGGTTGGTCCCGGGCTGCCGGAAAGAACCATTGCCGGTGATTCTAGAGGAAACCATCGATTACATTTCGGCGCTTCAGATGCAAATCCGAGCCATGAACGCTCTCGCCGACCGATTCGCCGCCTCTACTTCTAGTGCCGCCTCCGCACCACCCTGCTAA 639 0.5884 MASSLISNPVTNTDRSRDACKRKKKKKAALLKHHQEDQIQTHARWKSQAQQQIYSSKLHQALARVNLGSSGSDGASRRGKAVREAADRVLAVTAKGRTRWSRAILASRLKLKFRKHRKQRIPTAAAATTGISRSRKPRVSVYRLKGKSLPAVQRRVRFLGRLVPGCRKEPLPVILEETIDYISALQMQIRAMNALADRFAASTSSAASAPPC 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1583 212 CDD bHLH_AtIBH1_like 143 196 IPR044549 GO:0006355
Dere14g1583 212 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 47 199 IPR044660 GO:0006355
Dere14g1583 212 MobiDBLite consensus disorder prediction 1 20 - -
Dere14g1583 212 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 155 200 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1583 Dere-ChrDere14 17386287 17386925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1583 40 211 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 56.906 1.46e-54 172