Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1580 ATGGAGGAGAATAAGAAGAGCGAAGGAGAGCCCAGGTCCTCTTCCATGGCATTTTCCGACGAGATTCTGATGAACCACGCTTCTGCTTTTTCCGGCATCTTGGATACGGCGCCGTTTTCTTCATGCGATCATCATCATCAACAACAACAACAACATCAACCTGACAGGCCTTGTAATTCCTTCGGCTTCATGGACTTGCTCAGTGTCCATGATTTTACTACCCCTTCTTTATTCGATTGGCTTCCCGCCACCACCGCTACAGCACCCTCTTCCTCCGCCACCGCCATCGCCGTCGACGACGACGAAATCCATAGCCTCCTACCGTCGCCGGCGAGCTCCGGTGGGGTGCTGCACACTCCGCCGACCCCAAACTCCTCCTCGATTCCATCGTCATCCAACGAAGCCGCTGCCAGTGCCGGCGGCAGCATGGAGGAAGAGCAACAGAGTAGTAAAACACAGGATGAAGATGTAGATGGAGGAAGAGGAGGAGACGACCAAGATCAAGACAAATCTAAGAAACAGCTGAAACCAAAAAAGAAGAAGCAAAAGAAAGAGAGAGAACCAAGATTTGCGTTCATGACAAAAAGCGAAGTGGATCATCTCGACGATGGATACAGGTGGCGCAAGTACGGCCAAAAAGCTGTCAAAAACAGCCCATTTCCCAGGAGCTATTATCGTTGCACCACGGCAGGTTGCGGCGTGAAGAAGAGAGTGGAGCGGTCGTCCGACGACTCTACGGTGGTGGTGACCACCTACGAGGGCCAGCACACGCATCCGAGTCCGGTGGCGGCGACTCGGGCGAACCTCGGTTTCGGCGGCGGCTTTGGCTCGGCCGGCTTCGTGGTTCCACAGCCACAACAAAATTATGAGTTTCAGCAACAGAATGTGTCGTCGTCTTTGTTATATAACTCAACCCCTCCTCTGAGCATTGTCTCTAGCAACTATATGAATATGAATATGAGTATCAGTTCTCCTACGACGTCGTTCTCGAGCAGCTACCTCGAAGAGAACAGTAATGGAGGGTTTGGAGTAGCAGGTAAAATGGATCATCAAGCTAGTTTTTCGAGAGACAATGGGCTTCTTCAGGACATTATTGTGCCATCACAGATGAGGAAGGAGGAGAAGCAATGA 1131 0.5137 MEENKKSEGEPRSSSMAFSDEILMNHASAFSGILDTAPFSSCDHHHQQQQQHQPDRPCNSFGFMDLLSVHDFTTPSLFDWLPATTATAPSSSATAIAVDDDEIHSLLPSPASSGGVLHTPPTPNSSSIPSSSNEAAASAGGSMEEEQQSSKTQDEDVDGGRGGDDQDQDKSKKQLKPKKKKQKKEREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPFPRSYYRCTTAGCGVKKRVERSSDDSTVVVTTYEGQHTHPSPVAATRANLGFGGGFGSAGFVVPQPQQNYEFQQQNVSSSLLYNSTPPLSIVSSNYMNMNMSISSPTTSFSSSYLEENSNGGFGVAGKMDHQASFSRDNGLLQDIIVPSQMRKEEKQ 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1580 376 ProSiteProfiles WRKY domain profile. 196 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere14g1580 376 Pfam WRKY DNA -binding domain 202 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere14g1580 376 SMART WRKY_cls 201 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere14g1580 376 MobiDBLite consensus disorder prediction 148 173 - -
Dere14g1580 376 MobiDBLite consensus disorder prediction 41 57 - -
Dere14g1580 376 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 118 298 IPR044810 GO:0003700
Dere14g1580 376 FunFam WRKY transcription factor 57 187 261 - -
Dere14g1580 376 SUPERFAMILY WRKY DNA-binding domain 193 261 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere14g1580 376 MobiDBLite consensus disorder prediction 105 191 - -
Dere14g1580 376 Gene3D WRKY domain 186 262 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere14g1580 376 MobiDBLite consensus disorder prediction 38 58 - -
Dere14g1580 376 MobiDBLite consensus disorder prediction 115 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1580 Dere-ChrDere14 17324131 17325913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1580 59 374 WRKY Transcription Factor Family AT2G47260 43.425 1.41e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere14g1580 WRKY 8.2e-27 CL0274