Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1567 ATGCGCAGCTGCAGATTTGTCAATAACTTCTCTAGGGTTTGCCAGAAACAAGGGAATCTAATCAAAGATAAGGATAAGCGCCGTATATGTACTCAAAACCTTACATTACATAAAAACGAAGAAGTAGTAAATGCGATGTTTGGAGTAAAGATGCCCAGCTTGGCTGCAGATATGAATATAATTATGTGTCTTCTGTCCCTGTGTTTTTACCCTTTAGCTAATTCATTCATTAAAGCATCAGAAATAAATGTAGAACCCTATGAACTTGATAGGGTAATTAATCTTCCTGGCCAACCTTCAAGCCCGTCAGTCTCACATTTTTCAGGTTATATCACTGTCAATAAAGATCATGGGAGGGCTCTTTTCTACTGGTTCTTTGAAGCTCAATCTGAACCATCGAAGAAGCCTCTCCTCCTCTGGCTCAATGGAGGACCTGGATGCTCCTCAATTGGGTATGGTGCGGTTGTTGAGATTGGACCTCTTACAGTCAACAAAAATGGCGAAGGACTAAATTTCAACCCCTACGCCTGGAACCAAGAGGCAAATTTGTTATTTGTGGAGTCCCCGGTTGGAGTTGGTTTTTCTTACACCCATACATCTTCTGATCTCACCATATTAGAGGATGGTTTTGTGGCTGAGGATGCCTACAATTTCTTGGTAAATTGGCTGCAAAGGTTCCCACAGTTTAAATCCCGAGATTTCTTTATAGCAGGAGAGAGTTATGCTGGCCACTATATCCCTCAGCTCGCGGAGCTCGTCTTTGATCGAAATAAAGATAGAAACAAATACTTATTTATCAATCTTAAAGGCTTTATTGTGGGGAATCCAGAAACCGAAGATTATTATGACAATAAAGGCCTCCTGGAATATGCATGGAGCCATGCAGTCATATCAGATCAGGAATATGACAAAGCAAGACAAGTATGTGACTTTAAGCAATTTGAATGGTCTAAGGAATGCAATGAGGTCATGAATGTAGTCTTCCAAGATTATTCAGAGATAGACATCTACAACATTTATGCCCCAAAGTGTCGCCTAAATAATACTTCCTCTGTAGCTTATGATAGTAAGAGTAGAAGATCCGAATCACTTCCTAAGGTGAGAAATGATTATAGACTTAGGAGGATGAGAATTTTTGGAGGCTATGATCCATGTTATTCCACATATGCGGAAGAATATTTCAATAGGATAGATGTTCAGTCATCTTTTCATGCTAATGTTGAAGGAGGAAACACTAATGTTGCGTGGAAGACTTGCAATGATTCCATATTAAGGACATATAACTTCTCTGTTTTCTCGGTCCTGCCCATCTACACAAAACTCATCAAGGGTGGGCTCAAGGTCTGGATTTACAGTGGGGACACAGATGGCAGAATACCAGTGATAGGGACAAGATATTGCATTGAGGCTTTAGGATTACCTCTCAAGTCTAGCTGGCGATCTTGGTACCATTATAATCAGGTTGGAGGAAGGATAGTGGAGTATGAAGGGCTAACTTACGTGACAGTGAGAGGAGCAGGTCATTTGGTGCCCCTCAACAAGCCCAGTGAGGCTCTCTCCCTTATTCATTCTTTCCTATCAGGAGAGCATCTCCCTGCCCGTCCTTGA 1608 0.4136 MRSCRFVNNFSRVCQKQGNLIKDKDKRRICTQNLTLHKNEEVVNAMFGVKMPSLAADMNIIMCLLSLCFYPLANSFIKASEINVEPYELDRVINLPGQPSSPSVSHFSGYITVNKDHGRALFYWFFEAQSEPSKKPLLLWLNGGPGCSSIGYGAVVEIGPLTVNKNGEGLNFNPYAWNQEANLLFVESPVGVGFSYTHTSSDLTILEDGFVAEDAYNFLVNWLQRFPQFKSRDFFIAGESYAGHYIPQLAELVFDRNKDRNKYLFINLKGFIVGNPETEDYYDNKGLLEYAWSHAVISDQEYDKARQVCDFKQFEWSKECNEVMNVVFQDYSEIDIYNIYAPKCRLNNTSSVAYDSKSRRSESLPKVRNDYRLRRMRIFGGYDPCYSTYAEEYFNRIDVQSSFHANVEGGNTNVAWKTCNDSILRTYNFSVFSVLPIYTKLIKGGLKVWIYSGDTDGRIPVIGTRYCIEALGLPLKSSWRSWYHYNQVGGRIVEYEGLTYVTVRGAGHLVPLNKPSEALSLIHSFLSGEHLPARP 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1567 535 Gene3D - 385 423 - -
Dere14g1567 535 FunFam Carboxypeptidase 382 531 - -
Dere14g1567 535 Gene3D alpha/beta hydrolase 87 346 IPR029058 -
Dere14g1567 535 Gene3D - 434 528 - -
Dere14g1567 535 PRINTS Carboxypeptidase C serine protease (S10) family signature 186 196 IPR001563 GO:0004185|GO:0006508
Dere14g1567 535 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 185 IPR001563 GO:0004185|GO:0006508
Dere14g1567 535 PRINTS Carboxypeptidase C serine protease (S10) family signature 222 247 IPR001563 GO:0004185|GO:0006508
Dere14g1567 535 PRINTS Carboxypeptidase C serine protease (S10) family signature 498 511 IPR001563 GO:0004185|GO:0006508
Dere14g1567 535 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 92 515 IPR001563 GO:0004185|GO:0006508
Dere14g1567 535 ProSitePatterns Serine carboxypeptidases, histidine active site. 498 515 IPR033124 GO:0004185
Dere14g1567 535 FunFam Carboxypeptidase 434 528 - -
Dere14g1567 535 FunFam Carboxypeptidase 86 346 - -
Dere14g1567 535 ProSitePatterns Serine carboxypeptidases, serine active site. 236 243 IPR018202 GO:0004185
Dere14g1567 535 Pfam Serine carboxypeptidase 96 528 IPR001563 GO:0004185|GO:0006508
Dere14g1567 535 SUPERFAMILY alpha/beta-Hydrolases 92 531 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1567 Dere-ChrDere14 17130610 17135133 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1567 416 531 Calmodulin-binding Proteins AT2G22960 32.479 2.81e-14 69.7