Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere14g1557 | ATGGCTCGCATTCCCTATCCATATGGTGATCCTTTTTTCGGTGGTTCAATAGTTTCTTATGGTTCACAGGCTGGTAATCAACCCCAAATGGTGCCCCAAATGCTGGGGTTAGCATCCACCAGGGTTGCATTACCACTTGATCTTGCAGAAGACGGGCCTATTTATGTCAATGCTAAACAATACCATGGCATACTGAGAAGGCGACAGTCACGAGCAAAGCTTGAGGCTCAAAACAAACTCATCAAAAGTCGTAAGCCATATCTTCATGAGTCTCGGCATCGCCATGCATTGAACCGGGTTAGGGGATCTGGGGGACGCTTTCTCAGCACCAAACAGCTTCAACAGTCCAATGCAGAAGTTGTGACTGGTACAAACTCTGGCTCAGACTCTGTCAATTTGTATCAAAAGAAAGATGCATCAGAGGTGGAGATTCATCCCTCAAGGACTGGCGAAAATGCATCTTCCATCTCAACCTGCTCTGACATGACAAGTGTGTCCAGCAACAATGTCAATTTTAGGCAGCCTGAGCGAAAGTTCTTGGGGAACTCTAACATGGGCGCAGCATCACAGTGCAGCGGGGGACTCACCTTCAGTGGGACCCAGCACCGTGCTTCAATTGTCCGGTGA | 627 | 0.4833 | MARIPYPYGDPFFGGSIVSYGSQAGNQPQMVPQMLGLASTRVALPLDLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKLIKSRKPYLHESRHRHALNRVRGSGGRFLSTKQLQQSNAEVVTGTNSGSDSVNLYQKKDASEVEIHPSRTGENASSISTCSDMTSVSSNNVNFRQPERKFLGNSNMGAASQCSGGLTFSGTQHRASIVR | 208 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere14g1557 | 208 | ProSitePatterns | NF-YA/HAP2 subunit signature. | 55 | 75 | IPR018362 | GO:0003677|GO:0016602 | |
Dere14g1557 | 208 | ProSiteProfiles | NF-YA/HAP2 family profile. | 50 | 110 | IPR001289 | GO:0003700|GO:0006355 | |
Dere14g1557 | 208 | Gene3D | - | 50 | 112 | - | - | |
Dere14g1557 | 208 | SMART | cbf3 | 49 | 110 | IPR001289 | GO:0003700|GO:0006355 | |
Dere14g1557 | 208 | PRINTS | CCAAT-binding transcription factor subunit B signature | 53 | 75 | IPR001289 | GO:0003700|GO:0006355 | |
Dere14g1557 | 208 | PRINTS | CCAAT-binding transcription factor subunit B signature | 84 | 107 | IPR001289 | GO:0003700|GO:0006355 | |
Dere14g1557 | 208 | PANTHER | TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED | 6 | 169 | IPR001289 | GO:0003700|GO:0006355 | |
Dere14g1557 | 208 | MobiDBLite | consensus disorder prediction | 112 | 131 | - | - | |
Dere14g1557 | 208 | Pfam | CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B | 53 | 107 | IPR001289 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere14g1557 | Dere-ChrDere14 | 17030471 | 17031916 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere14g1557 | 2 | 116 | CCAAT-HAP2 Transcription Factor Family | AT1G17590 | 61.538 | 3.35e-41 | 140 |