Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1549 ATGGTTTGGTTTCAATGCGAGGATTGTGGGGACAATCTGAAGAAGCCCAAGTTACCGAATCATTTCCGAACTTGTTCCGCTTCTAGGTTGTCTTGCATTGACTGTGGGCAAATATTTGGGCAAGACACTGTTCAGCAACATACACAGTGCATTACGGAAGCGGAAAAGTACGGTCCCAAAGGCCAAAACAAAACTTTGAATGTTATAACTGCCAAACCTAACAAGGATAACAAGCAAAAGCCTGAAGTTGATATTCATGTTGGATTATCGGAACGGCCTCCGTGGTTTTGTAGTCTCTGCAATACGAGAGCTACAAGTAAGCAGACACTTGTTCTCCATGCTGATGGAAAGAAACACAGGGCAAAAGCTAGAGCATTCCATGCTGCAAAGCAACAACCAATCCAGACAGACATGTCTGCTCCTGATGCAAAGCTCCCAGTGGAGCATGCTTTTAATAATGAAGTGCAAGTCAACAATATTGTGGAGCAGCCAAAATTGCAAGATCCATCTAAGGATAATAACTTGAAATCAAGGAATGAAGTTTCTCCATTAAATAAAAAGAGGAAACCTGATGCGGTGGAGGATAACCATATGAGAAAAAAGGGCAGGGATGACACTTCAGGTGAGATGGAAAATGGGGAAGTAATTCGGGGTGAAAGATCAGAAGCTGCTGAAAGAGAGAATCATCTAAAGAAAGAAAAGATAGTTGACGTCAAGAAGAATATAAAGTGGAAGAACTTTATCAAATCAGCACTGAAATCTCATCCTGATGGAACATTGAAGATGAAGAAATTGAGAAAACTTGTCCATAAAGCCCTGCAGGAATCTGGCGTTGTATTGGATGAAACTGAAGTTAGTGAGGCACTTCAGCAGAAGATCAATTCAAGTTCCAGATTTGCAGTTGAGAACAAGTATGTGCGTTTGGTGGCCAAAGATAGCAAGGTGTAG 948 0.4156 MVWFQCEDCGDNLKKPKLPNHFRTCSASRLSCIDCGQIFGQDTVQQHTQCITEAEKYGPKGQNKTLNVITAKPNKDNKQKPEVDIHVGLSERPPWFCSLCNTRATSKQTLVLHADGKKHRAKARAFHAAKQQPIQTDMSAPDAKLPVEHAFNNEVQVNNIVEQPKLQDPSKDNNLKSRNEVSPLNKKRKPDAVEDNHMRKKGRDDTSGEMENGEVIRGERSEAAERENHLKKEKIVDVKKNIKWKNFIKSALKSHPDGTLKMKKLRKLVHKALQESGVVLDETEVSEALQQKINSSSRFAVENKYVRLVAKDSKV 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1549 315 PANTHER CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR 1 309 IPR039999 GO:0003677
Dere14g1549 315 Pfam LYAR-type C2HC zinc finger 30 57 IPR014898 -
Dere14g1549 315 Gene3D Classic Zinc Finger 89 131 - -
Dere14g1549 315 MobiDBLite consensus disorder prediction 169 214 - -
Dere14g1549 315 SUPERFAMILY beta-beta-alpha zinc fingers 30 58 IPR036236 -
Dere14g1549 315 FunFam cell growth-regulating nucleolar protein-like 1 50 - -
Dere14g1549 315 Pfam Zinc-finger of C2H2 type 95 119 - -
Dere14g1549 315 Gene3D - 1 50 - -
Dere14g1549 315 ProSiteProfiles Zinc finger C2HC LYAR-type profile. 1 26 - -
Dere14g1549 315 MobiDBLite consensus disorder prediction 162 214 - -
Dere14g1549 315 FunFam UBP1-associated proteins 1C 89 132 - -
Dere14g1549 315 SUPERFAMILY beta-beta-alpha zinc fingers 85 129 IPR036236 -
Dere14g1549 315 ProSiteProfiles Zinc finger C2HC LYAR-type profile. 27 51 - -
Dere14g1549 315 SUPERFAMILY beta-beta-alpha zinc fingers 1 26 IPR036236 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1549 1 144 C2H2 Transcription Factor Family AT2G19380 40.394 2.65e-41 149