Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1546 ATGAAGAAAGGAAGCTTAGGCCCAAATCTCAAACTCACTGTTCCCGCGTCTGATCAGCCTTCTTTTGCCAAGTTCCTGACTGAGAGCGGGACCTTCAAGGATGGGGATCTTTTAGTCAACAGGGACGGAGTTCGAATTGTCCCTCAGAGTGAAGTTGAAGCACCTACCCCCATCACGCCACTAGACAACCAGTTAAGTTTAGCAGACATAGACACAATCAAAGTGGTTGGAAAGGGAAGTGGCGGTATAGTGCAACTGGTGCAACACAAATGGACTAATCAGTTTTTCGCATTAAAGGTAATTCAAATGAATATTGAGGAATCCACGCGCAGGCAGATAGCACAAGAGCTGAAAATTAATCAGTCAGCTCAATGTCCTTATGTTGTTGTCTGCTACCAGTCCTTTTATGAAAATGGCGTTATATCAATCATCTTAGAGTACATGGATGGAGGGTCTCTAGCAGATCTTCTGAAGAAAGTGAAAGCTATTCCAGAAGCATATCTTGCTGCCATCTGCAAGCAGGTGCTGAAGGGTTTAATGTATCTTCACCATGAAAAACATATTATTCACAGGGACTTAAAACCTTCTAATTTGTTGATAAATCACAGAGGGGAAGTAAAGATCACTGACTTTGGTGTCAGTGCAATTATGGAAAATACATCTGGTCAAGCAAACACTTTCATTGGAACATACAACTATATGTCTCCTGAGAGAATCAATGGATTCCAGCGTGGCTACAACTACAAAAGTGATATATGGAGTTTGGGACTTATATTGCTTGAGTGTGCTACAGGGAGGTTTCCATATACACCACCAGATCAAGAAGGGTGGGGAAGTGTATTTGAGCTTATTGAAGCTGTTGTTGAAAATCCTCCTCCCTCTGCTCCATCTGATCAATTTTCCCCAGAGTTCTGCTCGTTTATATCAGCATGTTTACAGAAAGATCCAAAGGATAGATTGTCAGCTCAAGAACTTATGAGACATCCATATATCAACATGTATGAAGACTTGGATGTGGATCTTTTGGCTTACTTCTCCAATGCAGGATCTCCACTTGCTACTTTATAG 1068 0.4167 MKKGSLGPNLKLTVPASDQPSFAKFLTESGTFKDGDLLVNRDGVRIVPQSEVEAPTPITPLDNQLSLADIDTIKVVGKGSGGIVQLVQHKWTNQFFALKVIQMNIEESTRRQIAQELKINQSAQCPYVVVCYQSFYENGVISIILEYMDGGSLADLLKKVKAIPEAYLAAICKQVLKGLMYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMENTSGQANTFIGTYNYMSPERINGFQRGYNYKSDIWSLGLILLECATGRFPYTPPDQEGWGSVFELIEAVVENPPPSAPSDQFSPEFCSFISACLQKDPKDRLSAQELMRHPYINMYEDLDVDLLAYFSNAGSPLATL 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1546 355 ProSiteProfiles Protein kinase domain profile. 70 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1546 355 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 15 334 - -
Dere14g1546 355 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Dere14g1546 355 FunFam Mitogen-activated protein kinase kinase 6 151 350 - -
Dere14g1546 355 SMART serkin_6 70 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1546 355 CDD PKc_MAPKK_plant_like 68 335 - -
Dere14g1546 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Dere14g1546 355 Gene3D Phosphorylase Kinase; domain 1 49 149 - -
Dere14g1546 355 Pfam Protein kinase domain 72 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1546 355 SUPERFAMILY Protein kinase-like (PK-like) 52 336 IPR011009 -
Dere14g1546 355 FunFam Mitogen-activated protein kinase kinase 6 40 149 - -
Dere14g1546 355 Gene3D Transferase(Phosphotransferase) domain 1 150 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1546 Dere-ChrDere14 16889634 16894224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1546 27 353 MAP Kinase Kinase Gene Family AT4G26070 70.393 7.33e-176 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Dere14g1546 Pkinase 3.6e-70 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g1546 14 16889634 16894224 Dere14g1546 14 16889634 16894224 ECH