Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1545 ATGGAGGAAATATCTTCTGCTGTTGCAGTGCCATTTACAATTGGGAAGTTGACGCAGAAAGAGTCATCAGTAACGAACCACATGGAAATAGCAGGGCTGAAGCTTATGGCCAATACAGCAGCTTTGATATTGAATCCTGCATTGGAGGATTGTGAGAATCAAAGGGATTTAAGTTCTCAGCATCAGATTGCTGTATCTGCAGAGGGAGAGGAAAATCAGGTTGGAGACGCCCCTGTTTCAGATATGATTATAAGATGTAACAGAAATTGGGCCTGGAATGAAACTCATAATCAGAAAAGCATGGAAGATGATTCCATGTTAGCAGTTGATTTTCAATGTCGACGTAATTCAAGCTCTCAATCTGCTACTGGGGATCAATCTTCACGGACTAATTGTTCTGAGATTGATTCAGCAATTAGTATCATCAAGGTTGAAGATGCTATAGCACTACAACCAGTGCAGAAAATGGTCTCTGCTGCAATGGATCTTGAGAGTGAGGATGCCAGTGGATCAGATGGGTGTGATCCTAAACCATCAGATTCGCTTCTTGTGATGTCAGAGGAGAAAATATGTAGAAGTAGCTGCCCGAATGGTTTAGAATTGAGTAGTGGGGCCTTTTGGGGGTTTTCATCGATCTGTGGAAGGAGACAGGAGATGGAAGATGCTATTGCTGTTGAGCCTCAACTCTTGCAAGTCCCTTCACAGATGCTAATGGATGACCATGTAAATGAAAACCCAAAATACTCGGAAGCTCACTTTTTCGGTGTCTATGATGGACATGGGGGTTGCCAGGTTGCTAATTACTGCCGGGAGCGTCTTCATTCAGTGTTGCTTGAGGAGATAGAGGCTACAGAAACAAGCTTGGGTGAAGAGAATGCAGGAGACAATTGGGAGGACCATTGGAGGAAAGCATTCTCCAAGTGCTTTCAGAAAGTTGATGGTGAGGTTGAAGGAAAACATGCGGCTAATAATGAAAACAACAGCCATGGATCTGAGTGTAGTAATGAACCTGTTGCTTCAGAAACTGTTGGTTCTACTGCTGTGGTTGCCATTTTAAGTCAAACCCGCATAATAGTTGCAAATTGTGGGGATTCAAGAGCAGTCTTGTGTCGTGGAAAAGAAGCCCTTCCATTGTCTGTTGACCACAAACCAAATAGCGAGGATGAGTGGACAAGAATAGAAGCTGCAGGAGGAAGGGTCATACAGTGGAATGGGTACCGAGTTCTTGGTGTTTTGGCAGTGTCAAGGTCCATAGGTGACAGATACTTGAAACCATGGGTAATTCCAGAACCAGAAGTGAAGTTTGTCCAGAGAGACAAAAATGACGAGTGCCTTATTCTAGCCAGCGATGGGTTATGGGATGCAATGACAAATGAAGAAGCCTGCCAAGCTGCAAGAAACCGAATCCTTCTTTGGCACAAGAAGTATGGCAATGGCAACAGTGGATCTACTGAACAAGCAGAAGGAGTTGATCCTGCAGCTCAGTCTGCTGCAGAGTATCTATCTAAACTTGCCCTCCAAAGGGGAAGTAAAGATAACATCTCTGTTATTGTTGTAGACTTGAAGGAACAAAGAAAATCTAAGAGAAAGGCATAG 1596 0.4373 MEEISSAVAVPFTIGKLTQKESSVTNHMEIAGLKLMANTAALILNPALEDCENQRDLSSQHQIAVSAEGEENQVGDAPVSDMIIRCNRNWAWNETHNQKSMEDDSMLAVDFQCRRNSSSQSATGDQSSRTNCSEIDSAISIIKVEDAIALQPVQKMVSAAMDLESEDASGSDGCDPKPSDSLLVMSEEKICRSSCPNGLELSSGAFWGFSSICGRRQEMEDAIAVEPQLLQVPSQMLMDDHVNENPKYSEAHFFGVYDGHGGCQVANYCRERLHSVLLEEIEATETSLGEENAGDNWEDHWRKAFSKCFQKVDGEVEGKHAANNENNSHGSECSNEPVASETVGSTAVVAILSQTRIIVANCGDSRAVLCRGKEALPLSVDHKPNSEDEWTRIEAAGGRVIQWNGYRVLGVLAVSRSIGDRYLKPWVIPEPEVKFVQRDKNDECLILASDGLWDAMTNEEACQAARNRILLWHKKYGNGNSGSTEQAEGVDPAAQSAAEYLSKLALQRGSKDNISVIVVDLKEQRKSKRKA 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1545 531 SMART PP2C_SIG_2 237 521 IPR001932 -
Dere14g1545 531 SMART PP2C_4 196 519 IPR001932 -
Dere14g1545 531 Gene3D - 199 531 IPR036457 -
Dere14g1545 531 ProSiteProfiles PPM-type phosphatase domain profile. 206 521 IPR001932 -
Dere14g1545 531 PANTHER PROTEIN PHOSPHATASE 143 521 IPR015655 GO:0004722|GO:0006470
Dere14g1545 531 Pfam Protein phosphatase 2C 208 514 IPR001932 -
Dere14g1545 531 ProSitePatterns PPM-type phosphatase domain signature. 253 261 IPR000222 GO:0043169
Dere14g1545 531 CDD PP2Cc 208 521 IPR001932 -
Dere14g1545 531 FunFam Protein phosphatase 2C 16 195 531 - -
Dere14g1545 531 SUPERFAMILY PP2C-like 205 523 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1545 Dere-ChrDere14 16884314 16887813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1545 84 530 PP2C-type Phosphatase Gene Family AT4G26080 50.658 4.34e-136 399
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g1590 03 26399788 26402268 Dere14g1545 14 16884314 16887813 CCT