Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1542 ATGGAGGACAAACATGATGTGGAGAAGGAGGAGGAGGTGGGGCCCATGGCTGGGGAGGAAGAGGAAGGAGAGGTGGGTTCGAGCTTGACGATGGAGAGGGTGGCTGCTGCCAAGAAATTCATCGAGAACCATTACAGAGCTCAGATGAGGCTCATCCGAGACCGCAAGGAGAGGCGTTTAGTGTTGGAAAAGAAGTTAGAATCATCTCATGTACCAAAAGAGGAACAGATATATCAACTGAAGGATTTGGAGCGCAAGGAAACTGAGTATATCCGATTAAAACGACACAAAATATGCGTTGATGATTTTGACCTTCTAGCTATCATTGGGAGGGGAGCCTTTGGAGAGGTAAGACTTTGTCGCGAGAAGAAATCAGGCAATATTTATGCCATGAAAAAGTTGAAAAAGTCTGAAATGCTCAGCAGGGGGCAGGTTGAACATGTTAGAGCTGAAAGGAACTTACTCGCAGAAGTTGCCAGTCACTGCATTGTGAAGCTCTATTACTCCTTTCAGGACGCTGACTACTTATATCTGATAATGGAATATTTACCTGGCGGTGATATAATGACTTTGCTGATTAGAGAAGAAACTTTGACAGAAAGTGTGGCTAGATTTTACATCGCTCAGAGTGTTTTGGCCATAGAGTCTATTCATAAACACAATTACATTCACCGAGATATAAAACCTGACAACCTTCTATTGGACATAAATGGTCATATGAAGCTCTCTGATTTTGGTCTTTGCAAGCCACTTGACTGCAAAAATTTATCATCAATAAATGAATGTGAAGTCCTAGATGATGAGAACTTGAATGATACCATGGACATTGATGAATCCTTACCAAATTCCAGATGTGGACGGCGTTGGAAAAGCCCCCTTGAACAACTTCAGCATTGGCAAAGAAACAGAAGGAAGTTGGCGTTTTCCACGGTTGGAACTCCAGACTATATTGCTCCTGAAGTGTTGCTGAAAAAGGGATATGGCGTGGAGTGTGACTGGTGGTCCCTTGGTGCTATAATGTATGAGATGCTTGTTGGTTATCCCCCATTTTACTCTGATGACCCAGTAACAACGTGCAGAAAGATTGTAAATTGGAAAAATCACTTAAAATTTCCAGAGGAAGCAAGATTGTCACCTGAGGCGAAGAATCTAATTTGCAGGTTGCTTTGTGATGCCGACCAAAGGCTTGGTACTAGAGGGGCAGATGAAATTAAAGCTCATCCTTGGTTCAAAGATGTTGTATGGGACAAGCTCTATGAAATGGAAGCAGCATTCAAACCGCAAGTCAATGGAGAGCTTGACACTCAAAATTTTATGAAATTTGATGAGGTTGAACCACCAAAACCAAAACCAACTAGAACGGGATCCGGTCCGATCAGGAAGATGCTATTGACTCCTCAAGATCTTAGCTTTGTTGGTTATACATATAAAAACTTTGAAGCTGTCAAGGGAATGCGTCGTTCTGTGGATACAGGTACAGTGGGCATCCCATCACCAATGACTCCAGGCCTTGAGTCCCCACAGAGTGATTCAGGAATAGACTATTCTTCTGGATTCTCTATGGACAGGCCATAA 1575 0.4292 MEDKHDVEKEEEVGPMAGEEEEGEVGSSLTMERVAAAKKFIENHYRAQMRLIRDRKERRLVLEKKLESSHVPKEEQIYQLKDLERKETEYIRLKRHKICVDDFDLLAIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDADYLYLIMEYLPGGDIMTLLIREETLTESVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDINGHMKLSDFGLCKPLDCKNLSSINECEVLDDENLNDTMDIDESLPNSRCGRRWKSPLEQLQHWQRNRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVNWKNHLKFPEEARLSPEAKNLICRLLCDADQRLGTRGADEIKAHPWFKDVVWDKLYEMEAAFKPQVNGELDTQNFMKFDEVEPPKPKPTRTGSGPIRKMLLTPQDLSFVGYTYKNFEAVKGMRRSVDTGTVGIPSPMTPGLESPQSDSGIDYSSGFSMDRP 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1542 524 ProSiteProfiles Protein kinase domain profile. 103 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1542 524 FunFam Non-specific serine/threonine protein kinase 187 254 - -
Dere14g1542 524 Pfam Protein kinase C terminal domain 429 476 IPR017892 GO:0004674|GO:0005524|GO:0006468
Dere14g1542 524 MobiDBLite consensus disorder prediction 1 28 - -
Dere14g1542 524 FunFam Non-specific serine/threonine protein kinase 64 186 - -
Dere14g1542 524 FunFam Non-specific serine/threonine protein kinase 309 428 - -
Dere14g1542 524 FunFam Non-specific serine/threonine protein kinase 429 439 - -
Dere14g1542 524 Gene3D Phosphorylase Kinase; domain 1 101 186 - -
Dere14g1542 524 Gene3D Phosphorylase Kinase; domain 1 429 439 - -
Dere14g1542 524 ProSitePatterns Protein kinases ATP-binding region signature. 109 132 IPR017441 GO:0005524
Dere14g1542 524 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Dere14g1542 524 Gene3D Transferase(Phosphotransferase) domain 1 309 428 - -
Dere14g1542 524 Gene3D Transferase(Phosphotransferase) domain 1 187 253 - -
Dere14g1542 524 PANTHER SERINE/THREONINE-PROTEIN KINASE 24 444 - -
Dere14g1542 524 MobiDBLite consensus disorder prediction 502 516 - -
Dere14g1542 524 SMART pkinase_C_6 411 478 IPR000961 GO:0004674|GO:0005524|GO:0006468
Dere14g1542 524 SMART serkin_6 103 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1542 524 CDD MobB_NDR_LATS-like 37 98 - -
Dere14g1542 524 ProSiteProfiles AGC-kinase C-terminal domain profile. 411 486 IPR000961 GO:0004674|GO:0005524|GO:0006468
Dere14g1542 524 MobiDBLite consensus disorder prediction 493 524 - -
Dere14g1542 524 CDD STKc_NDR_like 101 477 - -
Dere14g1542 524 SUPERFAMILY Protein kinase-like (PK-like) 100 458 IPR011009 -
Dere14g1542 524 Pfam Protein kinase domain 307 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1542 524 Pfam Protein kinase domain 106 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1542 Dere-ChrDere14 16816156 16826580 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1542 20 516 AGC Kinase Gene Family AT2G19400 75.551 0.0 767
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Dere14g1542 Pkinase 2.4e-42 CL0016