Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1538 ATGAGATCAGTTGCCGTTGCCATCAACAGCGGTTCCGGCGCCGGAAAGGGTAGCCGGCGAGCCGTCCAGTGGGCGGTGGAGAATCTTGTGCCTCAAGCGGATAGGTTCATCTTAGTTCACGTCATGCCCAGAATCACTTCAGTTCCTACCCCATCTGGAGAGTGTACTCATATTATGGATCTAGATGCCAATGTAGCGGCAGCTTATGTTGAGGATGTGAAAGCAAAGTTCGAGCAAATCTTTATTCCATTCAAGAAACTCTGCAAAACAAGCACAGTCGAAACTTTGTTGCTAGAAGATGACGATCCTGCAACTGCACTACTTAGATATATATCAGACTCGAAGATTCAAATATTAGTGTTGGGAAATTGCTCTTCAAATCTTATCACAAGGAAGCTAAAAGGACCAGGGATATCCACAACTGTTCTAAGATGTGCTCCTGACACTTGTGATGTATATCTTGTAGCTCGAGATAGAACTATATCAAAATTAGCTGATTCTTCATCCTCACCCTCTTGTGAAACTAGCCCTAGGTACTCTATGTCTGCTCAAGGGAATAATGGAGACAGTGATGCTGGCATTGGTAGAGAAATGTCTGGACTTAATTCTTCCACAACAGGACCTAAATCTCTCCAAAACTTCAGATTTCCATCAACGTCAGAGTGGAGCTACATAGGTTCTCAAACATCTAGTCCCATAAATCAAGAAGGAAATCTAGAGAACTTTAGAGATGATGTTGAAACCATTAGCATTCACTCGTTTGATTCCATGGCTTCTGCACAATGTGAACAACCAGTCATGAAAGAAGTGGAGCAGCTGAAGCTGGAGTTGCAGAATACTATTGCTATGTACAAGCAGGTTTGTGAAGAGTTGGTTCATGCTAAAACCAAGGTTCGTTTACTTTCATCTGAATATGTTGAAGAATCAAGAAGAGTAAATGCTTCCCTGAAAAGAGAGGAGACTCTGAGAAAGATTGCTGCTGAAGAAAAAGAGAAGTATTTAAAAGTCATGAAGGAAATTGAGGCGGCAAAAAATATGTTTGCAAAAGAGTCTTATGAAAGGCAAATGGCTGAACTTAATGTGATCAAAGAATCCCTGGAAAAGCAGAGAATACTTGATACATTGCTCTCAAGTGACAGGAGATACAGAAAGTACACTATGGATGAAATTAAAGAAGCAACAAACTTCTTTTCAGAGGATTTTTTAATTGGTGAAGGAGGTTATGGGAAAGTTTATAAGTGCAGCCTTGATCACACACCAGTAGCTGTAAAGGTTCTCCACCATGATGCAAATAACAAGAAAGAGGAGTTTCTGAAAGAGGTTGAGATTCTGAGTCAGCTACACCATCCACACATGGTTTTGCTGCTAGGAGCCTGTCCTGAAACTGGTTGCCTTGTTTATGAATTCCTTGAAAATGGAAGTCTCGAGGACTATCTTTTCAATAAGAGTGGGAAGCCACCACTTCCTTGGTTCATTCGATTTCGTTTAGTTTTTGAAGTGGCTTGTGGGTTATCATTCTTACATAATTCAAAGCCTGAGCCAATTGTTCATCGAGATATGAAACCTGGAAATATCTTGTTAGACAGAAATTATGTGAGCAAAATTTCAGATGTTGGGTTGGCGAAACTCCTTTCAGACGTCGTGCCCGACAATGTCACTGAGTACAGAGAATCTGTGCTTGCTGGTACTCTTCACTACATGGATCCAGAGTATCAGAGAACTGGTACTGTCCGACCAAAATCAGATGTATATGCTTTGGGAGTCATAATTCTTCAATTGATTACTGCTCGCCATGCACGTGGACTCATTGTGGCCGTTGAAAATGCAGTTACAAATGGCTCCTTCCCTCAAATTTTAGATAAGTCAGCTGGAGATTGGCCATTGGCTGAGGCAGAAGATTTGGCTCAAATTGCCCTAAAATGCTCTGCACTTAGATGCCGAGATAGACCAGATCTTGATACTGAAGTTCTTCCACTACTCAGAAGACTCTGTGATGTTGCAAATGTTACTGCAAAGATGGGAAGAAATAGCATATCCCCACCAAGCCAGTATTATTGCCCAATCCTTCAGGAAATAATGGATGATCCACATATTGCTGCGGATGGTTTTAGTTACGAGTACAGAGCAATCAAGGCATGGCTCAGCAAACACAATGTGTCACCTGTCACTAAGCTTAGACTCCAGCATTCCATGTTGACCCCAAACCATACCTTACGTTCTGCCATTCAGGAGTGGAGGTCGGAACAGAAGTGA 2253 0.419 MRSVAVAINSGSGAGKGSRRAVQWAVENLVPQADRFILVHVMPRITSVPTPSGECTHIMDLDANVAAAYVEDVKAKFEQIFIPFKKLCKTSTVETLLLEDDDPATALLRYISDSKIQILVLGNCSSNLITRKLKGPGISTTVLRCAPDTCDVYLVARDRTISKLADSSSSPSCETSPRYSMSAQGNNGDSDAGIGREMSGLNSSTTGPKSLQNFRFPSTSEWSYIGSQTSSPINQEGNLENFRDDVETISIHSFDSMASAQCEQPVMKEVEQLKLELQNTIAMYKQVCEELVHAKTKVRLLSSEYVEESRRVNASLKREETLRKIAAEEKEKYLKVMKEIEAAKNMFAKESYERQMAELNVIKESLEKQRILDTLLSSDRRYRKYTMDEIKEATNFFSEDFLIGEGGYGKVYKCSLDHTPVAVKVLHHDANNKKEEFLKEVEILSQLHHPHMVLLLGACPETGCLVYEFLENGSLEDYLFNKSGKPPLPWFIRFRLVFEVACGLSFLHNSKPEPIVHRDMKPGNILLDRNYVSKISDVGLAKLLSDVVPDNVTEYRESVLAGTLHYMDPEYQRTGTVRPKSDVYALGVIILQLITARHARGLIVAVENAVTNGSFPQILDKSAGDWPLAEAEDLAQIALKCSALRCRDRPDLDTEVLPLLRRLCDVANVTAKMGRNSISPPSQYYCPILQEIMDDPHIAADGFSYEYRAIKAWLSKHNVSPVTKLRLQHSMLTPNHTLRSAIQEWRSEQK 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1538 750 Gene3D HUPs 1 163 IPR014729 -
Dere14g1538 750 PANTHER OS02G0152300 PROTEIN 4 744 - -
Dere14g1538 750 Gene3D Phosphorylase Kinase; domain 1 376 469 - -
Dere14g1538 750 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 2 157 - -
Dere14g1538 750 Pfam U-box domain 681 749 IPR003613 GO:0004842|GO:0016567
Dere14g1538 750 Coils Coil 349 369 - -
Dere14g1538 750 MobiDBLite consensus disorder prediction 165 189 - -
Dere14g1538 750 ProSitePatterns Serine/Threonine protein kinases active-site signature. 515 527 IPR008271 GO:0004672|GO:0006468
Dere14g1538 750 SUPERFAMILY Protein kinase-like (PK-like) 379 652 IPR011009 -
Dere14g1538 750 Coils Coil 326 346 - -
Dere14g1538 750 ProSiteProfiles Protein kinase domain profile. 397 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1538 750 ProSiteProfiles U-box domain profile. 679 750 IPR003613 GO:0004842|GO:0016567
Dere14g1538 750 SMART Ubox_2 683 745 IPR003613 GO:0004842|GO:0016567
Dere14g1538 750 CDD STK_N 3 157 - -
Dere14g1538 750 Gene3D Transferase(Phosphotransferase) domain 1 470 677 - -
Dere14g1538 750 MobiDBLite consensus disorder prediction 165 212 - -
Dere14g1538 750 Coils Coil 267 290 - -
Dere14g1538 750 SMART serkin_6 397 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1538 750 Pfam Protein tyrosine and serine/threonine kinase 403 653 IPR001245 GO:0004672|GO:0006468
Dere14g1538 750 MobiDBLite consensus disorder prediction 197 212 - -
Dere14g1538 750 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 369 469 - -
Dere14g1538 750 CDD RING-Ubox_WDSUB1-like 681 735 - -
Dere14g1538 750 SUPERFAMILY RING/U-box 675 749 - -
Dere14g1538 750 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 679 750 IPR013083 -
Dere14g1538 750 ProSitePatterns Protein kinases ATP-binding region signature. 403 424 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1538 Dere-ChrDere14 16761202 16766344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1538 3 750 Plant U-box Gene Family AT5G57035 55.397 0.0 855
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Dere14g1538 PK_Tyr_Ser-Thr 4.6e-39 CL0016