Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1535 ATGGGTAGAGGAAGAGGCATAACAGGGTGTTGGTGTTGTTTAGTGTTGCTGACTCTGCTTCTCATACAGGAAGCAAAGAGTTCAATTGAGGAGAGCATAGGGTGTGCTCCGTCTCGTTGCGGCGAAATCACAGACATAAGATATCCCTTTGGACTGCGAGATGATCCAGCGAAGTGCGGCGACCCCACATACGAGTTAGCCTGCAAGAACAACGTCACTCTGCTTCTTTTGTACTCAGGAACGTACCGTGTGCTGAGAATCAACTACAACAACTCCACAATCCGACTTGTGGATCCTGGCATTCAAGAGGGTGATTGCTCTTCCCTGCCTCGCTATTTCTTGTACCAATCTAATTTCAGCGATACTTTCAATTATTCCTTCGGTTACGACACGGATCCCTATCTTGCCTCTCTGTGGCCAGACTCGAAAACTATATTCGAGCACGTCGTTTACTTGAACTGTAGCGATCCAGTGAGGGACGACCCAGAGTACGTGGATACGTCTCCATGCGTGAATTGGGAGTCCAAAGGGAAAGCTTATATCTATGCTCTGGTTGGAGACCTAGTGGTTGACAAGTTAAAATCTCAGTGTGGTGTGAAATTGGTGGCTACCATTACCTCAAATTGGAGTTCCTTCTTACAGGGAGAAAGCTTGTCGTACGCTGAGATTCACAGGGTTCTGTCCTATGGATTTGAGGTATACTGGTGGAAGCGAGCTTTCAAACTTGACATTCAAAATGTCCAACGCTATCAGGGTCAACACGAGTGTGCTACTCCCATGGGAATAATGTATTATACCGATTGTCGAAAGCTGGCAAAGTTGCGCATATTTGCAGAAGATTATCTCTACGGTATTTATAAAGGTAAGGGTACAGACCATCAAAACACTGACTATGATTTTAGCCTAACACAACCTGCCATTGTCCTAGGAGAAATCACTGGAAGATGTGTTTTGCCATACATTGTTGCCAGACTTCTATTTGGTATCATGTTCCTACTTGCGTTGTTAATTTATACATGCAGAAGAAGACACTTATCGATATATGAAAATATTGAAGATTTTTTGCAACTTCATAATCTCATGCCTATAAGGTACTCTTACAAGGAATTGAAAACAATGACTAAAGGTTTCAAGAACAAGTTAGGTGAAGGAGGCTTCGGCATTGTATACAAAGGGAAGCTAAGCAGTGGCCCTTATGTTGCTATCAAAATGTTAGGTAAATCCAAAGCTAACGGCCAAGAATTCATCAATGAAGTGGCGACCATTGGAAGGATACACCATTTCAATGTGGTACGCCTTGTTGGATTTTGTGTGGAAGGAACAAAGCGTGCTCTTGTTTATGAATTTATGCCTAATGGATCTCTAGATAGATATATTTTCTCAAAAGAAGGAAGTGTGCCCTTGAGTTATGAGAAAATATATGAAATATCTCTTGGAGTGGCTCGTGGGATTGCTTATCTTCATCATGGTTGTGATGTGAAAATATTGCATTTTGATATCAAGCCTCATAACATTCTTCTCGATGACAACTTTACCCCAAAAGTTTCAGATTTTGGACTTGCAAGGTCATATCCAGTTGATGATAGCATTGTCACTTTGACCGCAGCGAGAGGAACAATAGGGTATATGGCTCCTGAATTGTTTTACAAGAATATTGGGGGAGTGTCCTATAAGGCTGATGTTTACAGTTTTGGGATGCTGCTGATGGAAATGGCAAGTCGAAGGAGGAACTTGAATCCAAATGCAAAACATTCAAGTCAACTTTATTTTCCCTTGTGGATTTATGACCAATTTGATGAAGAGAAAGATATAGAGATGGAAGATTTGACCAAAGAAGAAAAGGATTTAGTAAAGAAAATGTTGATAGTAGCACTGTGGTGTATTCAGTTGAAACCTACTGATCGTCCCTCAATGAACAAAGTATTAGAGATGTTAGAAGCTAATAATGTTGAAAGCCTTGATATGCCTCCAAAACCTTATCTATATCCTAGTGAGACAGTTCTTATGGATGACATATCCAACTTTGATGAAACAACAGCCACTAACTCCATTCATTCTCCTAGCAATCTAGGTGAGGTTGCATGTGATGGGGAATAA 2097 0.4115 MGRGRGITGCWCCLVLLTLLLIQEAKSSIEESIGCAPSRCGEITDIRYPFGLRDDPAKCGDPTYELACKNNVTLLLLYSGTYRVLRINYNNSTIRLVDPGIQEGDCSSLPRYFLYQSNFSDTFNYSFGYDTDPYLASLWPDSKTIFEHVVYLNCSDPVRDDPEYVDTSPCVNWESKGKAYIYALVGDLVVDKLKSQCGVKLVATITSNWSSFLQGESLSYAEIHRVLSYGFEVYWWKRAFKLDIQNVQRYQGQHECATPMGIMYYTDCRKLAKLRIFAEDYLYGIYKGKGTDHQNTDYDFSLTQPAIVLGEITGRCVLPYIVARLLFGIMFLLALLIYTCRRRHLSIYENIEDFLQLHNLMPIRYSYKELKTMTKGFKNKLGEGGFGIVYKGKLSSGPYVAIKMLGKSKANGQEFINEVATIGRIHHFNVVRLVGFCVEGTKRALVYEFMPNGSLDRYIFSKEGSVPLSYEKIYEISLGVARGIAYLHHGCDVKILHFDIKPHNILLDDNFTPKVSDFGLARSYPVDDSIVTLTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMASRRRNLNPNAKHSSQLYFPLWIYDQFDEEKDIEMEDLTKEEKDLVKKMLIVALWCIQLKPTDRPSMNKVLEMLEANNVESLDMPPKPYLYPSETVLMDDISNFDETTATNSIHSPSNLGEVACDGE 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1535 698 SUPERFAMILY Protein kinase-like (PK-like) 359 646 IPR011009 -
Dere14g1535 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 495 507 IPR008271 GO:0004672|GO:0006468
Dere14g1535 698 CDD STKc_IRAK 381 646 - -
Dere14g1535 698 FunFam PR5-like receptor kinase 450 657 - -
Dere14g1535 698 SMART serkin_6 375 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1535 698 Pfam Protein kinase domain 378 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1535 698 FunFam serine/threonine-protein kinase PBS1-like 346 449 - -
Dere14g1535 698 ProSiteProfiles Protein kinase domain profile. 375 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1535 698 ProSitePatterns Protein kinases ATP-binding region signature. 381 403 IPR017441 GO:0005524
Dere14g1535 698 MobiDBLite consensus disorder prediction 679 698 - -
Dere14g1535 698 PANTHER RUST RESISTANCE KINASE LR10-RELATED 348 666 IPR045874 GO:0004672
Dere14g1535 698 Pfam Wall-associated receptor kinase galacturonan-binding 35 98 IPR025287 GO:0030247
Dere14g1535 698 Gene3D Phosphorylase Kinase; domain 1 349 449 - -
Dere14g1535 698 Gene3D Transferase(Phosphotransferase) domain 1 450 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1535 Dere-ChrDere14 16678207 16682911 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1535 15 694 Receptor kinase-like Gene Family AT5G38260 34.433 5.89e-111 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Dere14g1535 Pkinase 1.1e-46 CL0016