Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1534 ATGATGCAGGTATTGGCGCTGCTTACGAATCTGGGGAATGGTCAGATCCAGTATGTCCCTAATAATGGAATTGGATATCCCTTCAAATTCGTGGAGATCAAGTCGAATAATAGTGATCACCCTGACTCCCATCAATTTTATGCTTCTGCATGTAACAATAATGGGACGATGGTCGAGTTCCCGGCAATTCCTGCTCTTTCAGGAGTAAGACTCCCCGTCATAGACATAGACTATGAATCCCGCCAATTATTCACATGTGATCCTCAAGGTTGTCTTCCCAGACTCTTTCTAAAACTCTACAATTCATCGATTTATCCTTTGCAATTTGATCCAGCAAATCTGTATACTTCCGAAACACCTACCAATGTTACTTTCTTCGATTGTTCTTCGGTTGGGTCGAGATACCTCAAAAACTATTACGGATCACGTGAAGGTGCACAAGATATGTTCGTCTGCCCGATTTATGCTGCTGGCTCCAACGAGAGTGTCCTCCAGATGGACCTTGTTTCCTGCAGCAAGATGTTTCAGTTAGTTTCGCTGGTATCCGTGGACAACCTTCGGATGAACAACTTAATACTCAGATGGTCCGAACCAAAATGTGATGTTGAAAATGTTTACTGCAAACACAAATCAAGCAAGATACCCAGGATTGTTTTACCAACTACAGGTTCTATTGTGCTGGTCTTGCTGTGCATTGCATTCTTTCTCATATATCGCTACCTCAAAAGAAAAGGAGATGATGAAACAAGACTCGAAAAATTTTTGGAGGATTACAGGGCTCTAAAGCCTACTAGATTTTCTTATGCTGATCTTAAAAGAATGACAAACTATTTTAAGGATAAGCTGGGCGAAGGAGCTCATGGAGCAGTTTTCAAAGGTAAGCTATCTGTTGAAATTCCAGTGGCGGTAAAGGTGCTAAATAACTCAGAGGGGGATGGCAAAGAGTTCATTAACGAAGTGGGAACTATGGGTAAAATCCATCACATCAATGTAGTTCGCTTGCTAGGCTTCTGTGCTGATGGTTTCCATCGTGCCCTTGTTTACGATTATTTTCCAAATGGTTCACTACAAAAGTTCATGTCTTCCCCAGACAACAAGGAAAGCTTCCTTGGATGGCTGAAGCTGCAAGAAATCGCTCTTGGCATAGCCAAAGGGATTGAATATCTTCATCAAGGTTGTGATTTTCGAATTCTTCACTTTGATATCAATCCATGTAATGTGTTATTAGATCACAATTTTACTCCCAAAATTTCTGATTTTGGTCTAGCTAAGTTGTGTTCTAAAAATCAAAGTACAGTATCAATGACTGCAGCTAAGGGAACCTTAGGTTATATTGCGCCTGAAGTTTTCTCTAGAAATTTTGGAAATGTGTCCTACAAATCAGATATTTACAGCTATGGGATGTTGTTGCTAGAAATGGTTGGAGGAAAGAAAAATACTCACAAAGGCCAAGAAACTTTCCAAGTTCTATACCCGGAATGGATCCATAATCTGATTGAAGATAGAGATATAAATATTCCCATAGAAGATGAAGAAGACATCAAGATTGCAAAGAAATTAGCAATTGTGGGACTTTGGTGCATTCAATGGCACCCTATAAATCGCCCATCGATGAAAACAGTGATACAAATGCTGCAAGGAGAAGGAGTTAAATTGAAGGTGCCCCCTACTCCTTTTGATTTCACTACTTCAACTAATACAAGTACCATTATTCCTGCAAGACATATGAATTTAGAGTTAGAAGCGATTCATGAAGTGGAATGA 1764 0.3991 MMQVLALLTNLGNGQIQYVPNNGIGYPFKFVEIKSNNSDHPDSHQFYASACNNNGTMVEFPAIPALSGVRLPVIDIDYESRQLFTCDPQGCLPRLFLKLYNSSIYPLQFDPANLYTSETPTNVTFFDCSSVGSRYLKNYYGSREGAQDMFVCPIYAAGSNESVLQMDLVSCSKMFQLVSLVSVDNLRMNNLILRWSEPKCDVENVYCKHKSSKIPRIVLPTTGSIVLVLLCIAFFLIYRYLKRKGDDETRLEKFLEDYRALKPTRFSYADLKRMTNYFKDKLGEGAHGAVFKGKLSVEIPVAVKVLNNSEGDGKEFINEVGTMGKIHHINVVRLLGFCADGFHRALVYDYFPNGSLQKFMSSPDNKESFLGWLKLQEIALGIAKGIEYLHQGCDFRILHFDINPCNVLLDHNFTPKISDFGLAKLCSKNQSTVSMTAAKGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGKKNTHKGQETFQVLYPEWIHNLIEDRDINIPIEDEEDIKIAKKLAIVGLWCIQWHPINRPSMKTVIQMLQGEGVKLKVPPTPFDFTTSTNTSTIIPARHMNLELEAIHEVE 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1534 587 Gene3D Phosphorylase Kinase; domain 1 251 350 - -
Dere14g1534 587 FunFam serine/threonine-protein kinase PBS1-like 244 350 - -
Dere14g1534 587 FunFam PR5-like receptor kinase 351 556 - -
Dere14g1534 587 PANTHER RUST RESISTANCE KINASE LR10-RELATED 248 564 IPR045874 GO:0004672
Dere14g1534 587 Pfam Protein tyrosine and serine/threonine kinase 278 545 IPR001245 GO:0004672|GO:0006468
Dere14g1534 587 ProSiteProfiles Protein kinase domain profile. 276 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1534 587 ProSitePatterns Protein kinases ATP-binding region signature. 282 304 IPR017441 GO:0005524
Dere14g1534 587 Gene3D Transferase(Phosphotransferase) domain 1 351 554 - -
Dere14g1534 587 SUPERFAMILY Protein kinase-like (PK-like) 259 545 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1534 Dere-ChrDere14 16675914 16677764 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1534 23 558 Receptor kinase-like Gene Family AT1G66910 36.304 8.66e-103 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Dere14g1534 PK_Tyr_Ser-Thr 9.8e-44 CL0016