Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1532 ATGGATAGAGGAAGAGACATAACAGGGTGTTGGTGTTGTTTAGTGTTGCTGACTCTGCTTCTCATACAGGAAGCAAAGAGTTCAATTGAGGAGAGCAGAGGGTGTGCTCCGTCTCGTTGCGGCGAAATCACAAAAATAAGATATCCCTTTCGACTGCGAGATGATCCAGCGAAGTGCGGCGACCCCACATACGAGTTAGCCTGCGAGAACAACGTCACTCTGCTTCATTTGTACTCAGGAACGTACCGTGTGCTGAGAATCAACTACAACAACTCCACAATCCGACTCGTGGATCCTGGCATTCAAGAGGGTGATTGCTCTTCCCTGCCTCGCTATTTCTTGTACCAATCTAATTTCACCGATACTTTCAATTATTCCTTCCGTTACGACCCGGATCCCTATCTTGCCTCTCTGTGGCCAGACTCGAAACCTATATTCGAGCACGTCGTTTACTTGAACTGTAGCGATCCAGTGAGGGACGACCCAGAGTACGTGGATACGTCTCCATGCGTGAATTGGGAATCCAAAGGGAAAGCTTATATCTATGCTCTGGTTGGAGACCTAGTGGTTGACAAGTTAAAATCTCAGTGTGGTGTGAAATTGGTGGCTACCATTACCTCAAATTGGAGTTCCTTCTTACAGGGAGAAAGCTTGTCGTACGCTGAGATTCACAGGGTTCTGTCCTATGGATTTGAGGTATACTGGTGGAAGCGAGCTTTCAAACCTGGCATTCAAAATGTCCAACGCTATCAGGGTCAACACTACTGTGCTACTCCCATGGGACTAATGTATTATACCGATTGTCGAAAGCTGGCAAAGTTGCGCATATTTGCAGAAGGACTACACCAAATAGTGAGGGAGGGTACAGACCATCACTACAATGACTCTGATTTTAGCCTAACACAACGTGCCATCGTCTTAGGAGAAATTACTGGAAGATGTGTTTTGCCATACATTGCTGCCAGACTTCTATTTGGTATCTCATTCCTACTTGCGTTGTTAATTTATACATGCAGAAGAAGACACTTATCGATGTATGAAAATATTGAAGAATTTTTGCAACTTCATAATCTCATTCCAATAAGGTACTCCTACAAGGAATTGAAAACAATGACTAAAGGTTTCAAGAACAAGTTAGGTGAAGGAGGCTTCGGCACTGTATACAAAGGGAAGCTAAGCAGTGGCCCTTTTGTTGCTATCAAAATGTTAGGTAAATCCAAAGGTAACGGCCAAGAATTCATCAATGAAGTGGCAACCATTGGAAGGATACACCATTTCAATGTGGTACACCTTGTTGGATTTTGTGTGGAAGGAACAAAGCGTGCTCTTGTTTATGAATTTATGCCTAATGGATCTCTAGATAGATATATTTTCTCAAAAGAAGAAAGTGTGCCTTTGAGTTATGAGAAAATATTTGAAATATCTTTTGGAGTGGCTCGTGGGATTGCTTATCTTCATCATGGTTGTGAGGTGAAAATATTGCATTTTGATATCAAGCCTCATAACATTCTTCTTGATGACAACTTTGCCCCAAAAGTTTCTGATTTTGGACTTGCAAGGTTATATCCAGTTGATGATAGCATTGTCACTTTGACTGCAGCGAGAGGAACAATAGGGTATATGGCTCCTGAATTGTTTTACAAGAATATTGGTGGAGTGTCCTATAAGGCTGATGTTTACAGTTTTGGGATGCTGTTGATGGAAATGGCAAGTCGAAGGAGGAACTTGAATCCAAATGTAGAGCATTCAAGTCAACTTTACTTTCCCTTGTGGATTTATGACCAATTTAATGAAGAGAAAGATATAGAAATGGAAGATTTGACCAAAGAAGAAAAGGATTTAGCAAAGAAAATGTTGATAGTAGCACTATGGTGTATTCAATTGAAACCTACAGATCGTCCCTCAATGAATAAAGTATTAGAGATGTTAGAAGTTAATAATGTTGAAAGCCTTGAAATGCCTCCAAAACCTTCTCTATATCCTAGTGAGACGGTTCTTATAGATGACATATCCAACTTTGACGAAATAACAACCACTAACTCCATTCATTCTCCTAGTAGTCTAGGTGAGGTTGCATGTGATGGGGTCGCAATTGCTAAAAATGACTAG 2109 0.4116 MDRGRDITGCWCCLVLLTLLLIQEAKSSIEESRGCAPSRCGEITKIRYPFRLRDDPAKCGDPTYELACENNVTLLHLYSGTYRVLRINYNNSTIRLVDPGIQEGDCSSLPRYFLYQSNFTDTFNYSFRYDPDPYLASLWPDSKPIFEHVVYLNCSDPVRDDPEYVDTSPCVNWESKGKAYIYALVGDLVVDKLKSQCGVKLVATITSNWSSFLQGESLSYAEIHRVLSYGFEVYWWKRAFKPGIQNVQRYQGQHYCATPMGLMYYTDCRKLAKLRIFAEGLHQIVREGTDHHYNDSDFSLTQRAIVLGEITGRCVLPYIAARLLFGISFLLALLIYTCRRRHLSMYENIEEFLQLHNLIPIRYSYKELKTMTKGFKNKLGEGGFGTVYKGKLSSGPFVAIKMLGKSKGNGQEFINEVATIGRIHHFNVVHLVGFCVEGTKRALVYEFMPNGSLDRYIFSKEESVPLSYEKIFEISFGVARGIAYLHHGCEVKILHFDIKPHNILLDDNFAPKVSDFGLARLYPVDDSIVTLTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMASRRRNLNPNVEHSSQLYFPLWIYDQFNEEKDIEMEDLTKEEKDLAKKMLIVALWCIQLKPTDRPSMNKVLEMLEVNNVESLEMPPKPSLYPSETVLIDDISNFDEITTTNSIHSPSSLGEVACDGVAIAKND 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1532 702 Pfam Wall-associated receptor kinase galacturonan-binding 35 98 IPR025287 GO:0030247
Dere14g1532 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 493 505 IPR008271 GO:0004672|GO:0006468
Dere14g1532 702 SMART serkin_6 373 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1532 702 Gene3D Transferase(Phosphotransferase) domain 1 448 653 - -
Dere14g1532 702 Gene3D Phosphorylase Kinase; domain 1 347 447 - -
Dere14g1532 702 ProSitePatterns Protein kinases ATP-binding region signature. 379 401 IPR017441 GO:0005524
Dere14g1532 702 FunFam serine/threonine-protein kinase PBS1-like 343 447 - -
Dere14g1532 702 SUPERFAMILY Protein kinase-like (PK-like) 357 646 IPR011009 -
Dere14g1532 702 Pfam Protein kinase domain 376 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1532 702 CDD STKc_IRAK 379 644 - -
Dere14g1532 702 Coils Coil 593 617 - -
Dere14g1532 702 PANTHER RUST RESISTANCE KINASE LR10-RELATED 346 662 IPR045874 GO:0004672
Dere14g1532 702 FunFam PR5-like receptor kinase 448 655 - -
Dere14g1532 702 ProSiteProfiles Protein kinase domain profile. 373 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1532 Dere-ChrDere14 16603597 16608388 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1532 15 692 Receptor kinase-like Gene Family AT5G38260 34.473 2.55e-112 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Dere14g1532 Pkinase 3.3e-46 CL0016