Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1521 ATGTTCAATGAATGTGGTCCTGTAACTGCAGGTTCTATTGTGCTGGTCTTGCTGTGCATTGCATTCTTTCACATATATCGCTACCTCAAAAGAAAAGGAGATGATGAAGCAAGACTTGAAAAATTTTTGGAGGATTACAGGGCTCTAAAGCCTACTAGATTTTCTTATGCTGATCTTAAAGGAATGACAAACTATTTTAAGGAAAAGCTGGGCGAAGGAGCTCATGGAGCAGTTTTCAAAGGTAAGCTATCTGTTGAAATTCCCGTGGCGGTAGAGGTGCTCAATAACTCAGAGGGGGATGGCAAAGAGTTCATTAACGAAGTGGGAACTATGGGTAAAATCCATCACATCAATGTAGTTCGCTTGCTAGGCTTCTGTGCTGATGGTTTCCATCGTGCCCTTGTTTACGATTATTTTCCAAATGGTTCATTACAAAAAGTGGCTTGTTTTGTGATGGTAGTAGATGTTGATGGAGGTAATGGTAATGCTGAAGAGCACCGGGGGGTTCAGGTTGAGCATTTGGAGGCTGCCCCTATGCTAGTGTTGAAGACGAAGGCGATGCAGATGGGGGCTATTAGTTCAGTATCTGTTTAA 594 0.4259 MFNECGPVTAGSIVLVLLCIAFFHIYRYLKRKGDDEARLEKFLEDYRALKPTRFSYADLKGMTNYFKEKLGEGAHGAVFKGKLSVEIPVAVEVLNNSEGDGKEFINEVGTMGKIHHINVVRLLGFCADGFHRALVYDYFPNGSLQKVACFVMVVDVDGGNGNAEEHRGVQVEHLEAAPMLVLKTKAMQMGAISSVSV 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1521 197 FunFam serine/threonine-protein kinase PBS1-like 32 138 - -
Dere14g1521 197 PANTHER OS07G0415500 PROTEIN 9 147 - -
Dere14g1521 197 Pfam Protein tyrosine and serine/threonine kinase 66 146 IPR001245 GO:0004672|GO:0006468
Dere14g1521 197 SUPERFAMILY Protein kinase-like (PK-like) 48 147 IPR011009 -
Dere14g1521 197 ProSiteProfiles Protein kinase domain profile. 64 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1521 197 Gene3D Phosphorylase Kinase; domain 1 39 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1521 Dere-ChrDere14 16359419 16366837 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1521 13 146 Receptor kinase-like Gene Family AT1G66910 39.416 4.14e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Dere14g1521 PK_Tyr_Ser-Thr 6.4e-14 CL0016