Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1515 ATGTCTGTAGGATTTTTGTTGTTGGTGACAATGCAGGTATTGACGCTACTTGTCAATCTGGGGAATGCTCAGAACCTGCGTGTCCCTAATAATGGTCAGATTTCTGTAGGTGATAATCAATCTTGTTCTTGCACGAATAACAGTGTGACGAAGGTCGTGTTCCTGGCAATTCCTGGTCTTGCAGGAGAGGTTTACAAGGCATTGAAGCCTACTAGATTTTCTTATGCTGATCTTAAAAGAATGACAAACCATTTCAAGGATAAATTGGGCGAAGGAGCGCATGGATCAGTGTTTAAAGGTAAGCTATCCACTGAGATTCCAATAGCGGTAAAGGTGCTCAACAACTCAGAAGGGGATGGTAATGAGTTCATTAACGAAGTGGGAACTATGGGTAAAATCCATCAAATCAATGTGGTTCGCTTGCTAGGCTTCTGTGCTGATGGTTTCCATCGTGCTCTTGTTTATGATTTCTTTTCAAATGGTTCACTACAGAAGTTCATGTCTTCCCCAGACAACAAGGATAGCTTCCTTGGATGGCTGAAGCTGCAAGAAATCGCTATTGGCATTGCCAAAGGGATTGAATATATTCATCAAGGAGAAGGAGATGAATTAAAGGTGCCCCCTACTCCCTTAGATTCCACTGCTTCTACTAACACAAGCACCATTACTCCTGCAAGACCTTTGAATTCAGAGTTAGAAGTGATTCCTGAATTGGAATGA 720 0.4208 MSVGFLLLVTMQVLTLLVNLGNAQNLRVPNNGQISVGDNQSCSCTNNSVTKVVFLAIPGLAGEVYKALKPTRFSYADLKRMTNHFKDKLGEGAHGSVFKGKLSTEIPIAVKVLNNSEGDGNEFINEVGTMGKIHQINVVRLLGFCADGFHRALVYDFFSNGSLQKFMSSPDNKDSFLGWLKLQEIAIGIAKGIEYIHQGEGDELKVPPTPLDSTASTNTSTITPARPLNSELEVIPELE 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1515 239 ProSitePatterns Protein kinases ATP-binding region signature. 89 111 IPR017441 GO:0005524
Dere14g1515 239 MobiDBLite consensus disorder prediction 210 226 - -
Dere14g1515 239 Pfam Protein tyrosine and serine/threonine kinase 84 198 IPR001245 GO:0004672|GO:0006468
Dere14g1515 239 PANTHER RUST RESISTANCE KINASE LR10-RELATED 67 199 IPR045874 GO:0004672
Dere14g1515 239 SMART tyrkin_6 83 238 IPR020635 GO:0004713|GO:0006468
Dere14g1515 239 FunFam serine/threonine-protein kinase PBS1-like 60 157 - -
Dere14g1515 239 SUPERFAMILY Protein kinase-like (PK-like) 67 197 IPR011009 -
Dere14g1515 239 MobiDBLite consensus disorder prediction 204 226 - -
Dere14g1515 239 Gene3D Transferase(Phosphotransferase) domain 1 65 223 - -
Dere14g1515 239 ProSiteProfiles Protein kinase domain profile. 83 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1515 Dere-ChrDere14 16252853 16254989 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1515 66 199 Receptor kinase-like Gene Family AT1G66910 45.926 9.19e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Dere14g1515 PK_Tyr_Ser-Thr 2.4e-19 CL0016