Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1509 ATGGAGCCTCGTGTTGGTGACAAATTTCGGCTGGGACGGAAGATCGGAAGCGGCTCCTTTGGGGAGATCTATTTAGGTACTAATATTCAAACCAACGAAGAGGTCGCAATTAAGCTTGAAAATGTCAAGACAAAACATCCTCAGCTGCTTTACGAGTCCAAGTTATACAGAATTCTCCAGGGAGGAACTGGAATTCCAAATGTTAAATGGTTTGGAGTGGAGGGAGATTACAATGTTCTTGTGATAGATCTGCTTGGACCCAGTCTTGAGGATCTATTTGACTTTTGCAATAGAAAGCTCTCACTGAAGACAGTTCTCATGCTTGCAGATCAAATGATCAACCGTGTCGAGTTTTTCCATTCTAAATCATTTCTACATCGGGATATCAAACCGGATAATTTTCTCATGGGCTTGGGAAGGCGTGCAAATCAGGTTTACATTATTGATTTTGGTTTGGCTAAGAAATATAGAGACAGTACAACCCATCAACACATACCTTACAGGGAAAATAAGAATTTGACAGGAACTGCAAGATATGCAAGCATGAATACTCACCTTGGCATTGAGCAAAGCCGAAGAGATGATTTGGAGTCCCTTGGTTATGTCTTGATGTACTTCCTGAGAGGAAGTCTTCCTTGGCAGGGACTCAAAGCAGGAACAAAGAAACAGAAGTATGGGAAGATCAGTGAAAAAAAAGTTTCGACGTCAATTGAGTCCTTGTGCCGAGGTTATCCAACAGAATTTGCATCATACTTCCATTACTGCCGTTCATTACGGTTTGATGATAAGCCAGATTATGCTTACCTCAAAAGGATATTTCGTGACCTCTTTATCCGTGAAGGCTTCCAGTTTGATTATGTGTTTGACTGGACCATTTTGAAGTATCAGCAATCACAGCTGGCTACTCCTCCAGCAGGAGCCATTGGTCCTAGTGCTGGAACAAGTTCTGGAATGCCTCCAGCTGTAGCTAATGCTGATGGACAGACAGGAGGGGAAGAAGGGCGACCAGGAGGTATGGTGTCAATGGATTCCTGCAGGCGAACAGGGCCTATTTTAAATTCTTTATCAAGGGGGACCAATATCTTGGGTCAGTCAAGTGGGTCATCAAGGCCACTTGCCGTTTCAAGTAGCCGTGATGCATTTGTTGGTGGTGAGTCAGATATTCGTACTCGGACTACTGGGGCTAGCCCTGGAGCAGCACATAGAATTTCAAGTGGTCAAAGAAGTTCACCAATTGGATCTTCAGATCCCAAGCGAGTGTCTTCTGCAAGAAATGCTTCTCATGTCAAGAATTATGAAACTACAGTGAAGGGCATTGAGAGTTTGCAGTTAGAGAATGATGAGAGGAACCATTAG 1356 0.4351 MEPRVGDKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVKWFGVEGDYNVLVIDLLGPSLEDLFDFCNRKLSLKTVLMLADQMINRVEFFHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDSTTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYGKISEKKVSTSIESLCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPAGAIGPSAGTSSGMPPAVANADGQTGGEEGRPGGMVSMDSCRRTGPILNSLSRGTNILGQSSGSSRPLAVSSSRDAFVGGESDIRTRTTGASPGAAHRISSGQRSSPIGSSDPKRVSSARNASHVKNYETTVKGIESLQLENDERNH 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1509 451 FunFam Putative Casein kinase I 1 85 - -
Dere14g1509 451 MobiDBLite consensus disorder prediction 303 339 - -
Dere14g1509 451 FunFam Casein kinase I isoform delta-like 1 308 - -
Dere14g1509 451 MobiDBLite consensus disorder prediction 353 375 - -
Dere14g1509 451 CDD STKc_CK1_delta_epsilon 8 282 - -
Dere14g1509 451 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1509 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Dere14g1509 451 Gene3D Transferase(Phosphotransferase) domain 1 1 306 - -
Dere14g1509 451 MobiDBLite consensus disorder prediction 389 441 - -
Dere14g1509 451 MobiDBLite consensus disorder prediction 353 451 - -
Dere14g1509 451 Pfam Protein kinase domain 10 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1509 451 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1509 451 PANTHER CASEIN KINASE-RELATED 9 398 - -
Dere14g1509 451 SUPERFAMILY Protein kinase-like (PK-like) 6 290 IPR011009 -
Dere14g1509 451 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1509 Dere-ChrDere14 16165754 16169584 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1509 11 282 MAP Kinase Kinase Kinase AT1G62400 25.965 3.13e-12 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Dere14g1509 Pkinase 2.7e-26 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g1509 14 16165754 16169584 Dere14g1509 14 16165754 16169584 ECH