Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1504 ATGGACTCCATAGTTGGATTCTCAGAATCGAACGACATCAGCAATGGAAGTGGAATATGCTGTTTAGTTAACAATACGCAAACCCATTACACTCCAGAGCCTCCACCTTCCGACATCGCAGCCCTAAGGCGACTCTCCGACAACCTCGAATCAATCTTCGAAACCTCGGAGTCCGACGATTCCTTCGCCGACGCCAGAATCGTCCTCGGCGACGGCCGAGAAGTTCCGGTACACCGCTGCATTCTGTCGGCGAGGAGCCCTTTCTTCAAGAACGTGTTTTCCGGGAAGGAGAGAAATGGAGTGAAGCTGGAATTGAAGGACTTGGCAAGGGATTACGAGGTTGGGTTCGACGCGATTATGATTGTTGTCGGTTATTTGTACAGTGGGAGAGTGAGTTCGCTGCCTGAGGGTGTGTGTGTGTGTGTGGACGATGATTGCTCCCATTTTGGGTGTCGACCTGCTGTGGATTTCATGGTTGAAGTTCTCTACGCTTCCTCTACGTTTGAAATATCTGAGTTGGTTGCTCTCTACGAGAGCCATCTACTAAACATTCTTGACAAGGTTGCAGCAGATGACATTTTGTTGATTCTTTCCGTTGCAAACATATGTGGTAAATCCTATGAGAGACTGATAGCAAGGTGTACAGAGATGATTGTTAGATCTGATGTTGATGTCATTACACTTGAAAAAGCACTGCCACAACATATTGTGAAACAAATCATGGATACACGTATAGAACTCGGTTCAGACATGTCCAACAAAACCGGTTTACCAGATAAACATGTGAAGAGAATACATAGGGCGCTTGACTCTGACGATGTTGAGTTGGTCCAATTGCTCTTGAAAGAGGGACATACTAATCTAGACAAAGCCTATGCCCTTCACTACACTGTTGCATACTGTGACGCCAAGACTACAATTGAGCTTCTTGATCTCGGACTTGCTGATGTGAATTGTAAGAATCCTAGGGGATATAGTGTGCTGCATGTGGCTGCAATGAGGAAAGAGCCTAAGATTATAGTGTCCCTCTTGACGAAAGGAGCCCAGCCTTCTGATCTCACTTTGGATGGTAGGAAAGCCCTTCAGATTTCAAAGCGCCTTACTAAGGCGATGGATTATTATAATACTGAGGATGGAAAGGCATCTTCTAGGGATAGATTGTGCATAGAGATATTGGAACAAGCTGAGAGAAGAGAGCCTTTACTTGGGGAGGCATCTCTTTCTCTTGCAATGGCAGGGGATGATCTGCGTATGAAACTGCTATACCTTGAAAACAGAGTTGGATTGGCAAAGCTATTGTTCCCCATGGAAGCAAAAGTTGTGATGGACATTGCTCAACTTGATGGAACTAGTGAATTTCCATTATCAGACATATCTCCAAATGTGGGAAATAATACTCACAGGACAACAGTGGACTTAAATGAGGCACCTTTTAGAATTAAGGAGGAGCATCTAATCAGGATGAAAGCACTCTCTAGAACTGTGGAATTAGGAAAACGATTCTTCCCTCGTTGCTCAGGAGTACTGAACAAGATAATGGATGTTGATGACCTATCTCAGCTTGCATGCATGTATGATGACACTCCTGAAGAGAGACTGGTGAAGAGAAGAAGGTGCGTGGAGCTCCAAGAAGTTCTGAGTAAGGCTTTCAGTGAGGACAAGGAGGAGTTTGATAGGTCTGCAGTTTCATCTTCTTCTTCAACATCAATGGGAGTGGTTAGGAGGCATCCCATGGAGAACTAG 1743 0.4498 MDSIVGFSESNDISNGSGICCLVNNTQTHYTPEPPPSDIAALRRLSDNLESIFETSESDDSFADARIVLGDGREVPVHRCILSARSPFFKNVFSGKERNGVKLELKDLARDYEVGFDAIMIVVGYLYSGRVSSLPEGVCVCVDDDCSHFGCRPAVDFMVEVLYASSTFEISELVALYESHLLNILDKVAADDILLILSVANICGKSYERLIARCTEMIVRSDVDVITLEKALPQHIVKQIMDTRIELGSDMSNKTGLPDKHVKRIHRALDSDDVELVQLLLKEGHTNLDKAYALHYTVAYCDAKTTIELLDLGLADVNCKNPRGYSVLHVAAMRKEPKIIVSLLTKGAQPSDLTLDGRKALQISKRLTKAMDYYNTEDGKASSRDRLCIEILEQAERREPLLGEASLSLAMAGDDLRMKLLYLENRVGLAKLLFPMEAKVVMDIAQLDGTSEFPLSDISPNVGNNTHRTTVDLNEAPFRIKEEHLIRMKALSRTVELGKRFFPRCSGVLNKIMDVDDLSQLACMYDDTPEERLVKRRRCVELQEVLSKAFSEDKEEFDRSAVSSSSSTSMGVVRRHPMEN 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1504 580 SUPERFAMILY Ankyrin repeat 262 365 IPR036770 -
Dere14g1504 580 SMART BTB_4 63 185 IPR000210 GO:0005515
Dere14g1504 580 CDD BTB_POZ_NPR_plant 43 185 - -
Dere14g1504 580 SMART ANK_2a 323 352 IPR002110 GO:0005515
Dere14g1504 580 SMART ANK_2a 289 319 IPR002110 GO:0005515
Dere14g1504 580 SMART ANK_2a 260 288 IPR002110 GO:0005515
Dere14g1504 580 FunFam BTB/POZ domain and ankyrin repeat-containing protein NPR1 234 386 - -
Dere14g1504 580 Pfam NPR1/NIM1 like defence protein C terminal 365 569 IPR021094 -
Dere14g1504 580 Gene3D - 237 456 IPR036770 -
Dere14g1504 580 Pfam Domain of unknown function (DUF3420) 222 266 IPR024228 -
Dere14g1504 580 SUPERFAMILY POZ domain 46 184 IPR011333 -
Dere14g1504 580 Pfam BTB/POZ domain 56 182 IPR000210 GO:0005515
Dere14g1504 580 Gene3D Potassium Channel Kv1.1; Chain A 37 219 IPR011333 -
Dere14g1504 580 MobiDBLite consensus disorder prediction 552 580 - -
Dere14g1504 580 ProSiteProfiles BTB domain profile. 63 135 IPR000210 GO:0005515
Dere14g1504 580 ProSiteProfiles Ankyrin repeat profile. 323 355 IPR002110 GO:0005515
Dere14g1504 580 PANTHER REGULATORY PROTEIN NPR3 5 570 IPR044292 GO:0009862|GO:2000022|GO:2000031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1504 Dere-ChrDere14 16123167 16128075 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Dere14g1504 NPR1_like_C 1.1e-88 No_clan