Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1503 ATGGTGCTTGCTCGCGGTGGATCCGGTGAAATCGGCGGCGGAGGTCGGTCGGAATCTGTTACTAGAGTGTTATTGAACGCTTCTGTGGGAGGAGTGGCAAGAGTCAAATCAGAGCAAGTAATGATGTCTGATGAGGAAAGCATTCCTTCGAATTCTGGTGACTACTGTGATGGTGAAGGCAAAGTACACGACGACGTTTCCAGTGAGGATTCGGGAAGGAAGGCCTCGGAAGTGACGGAGGACGGGTTTATGGAGGCGGTTCCGCCGGTTCACGTCAAGCTAGAGGAACCAACCGGAGAGATGGATGCTGTCGACGGCGGAGTTGGTGCTGGAGTGAACGGGTCGTCGTCTTCGTCGTCGATCGGCTTGCCGAAACCGATGGAAGGGTTGCACGAGGTCGGCCCTCCACCGTTCCTCAAAAAGACCTTCGAAATGGTGGAGGACCCGGAGACCGACCCGATTGTATCCTGGAGCGAAGGTCGAGATAGCTTCATCGTTTGGGATTCTCACGAATTTTCCAAAATTCTTCTCCCTAAGTACTTCAAACACAGCAATTTCTCGAGCTTCATTCGCCAGCTTAACACATACGGATTTCGGAAGATTGATTCAGACCGTTGGGAGTTTGCAAATGAAGGGTTTCAAGGGGGAAAGAAGCATTTGCTGAAGAACATCAGGAGAAGAAGCAAGTATAACAAACTACAACAAGGAGGAGCATTCACTCCCATGAAGCCTGGCCTGGAGGCTGAAGTTGAGAAACTGAAGAAGGATCAGAACATATTGAAAGTGGAAATTCTGAAGCTGAGACAGCAGCAAGAGAATTCACAGGTCCAGCTCATAAATGTTCAAGAACGAGTACGGTCTGCCGAGTTGAAGCAGTACCAGATGCTGTTCTTCCTGACCAAAATGGCCAGAAAGCCAACGTTGGTTCAGCAGTTAATCCAGAGGGTAAAACGAAAAAGAGAGCTCGATGGGGGCGAGATTGGTAAGAGACCCAGATTACTCGGGTCCCATTGCCCTGTGGGCTTCCCTAGGGCCAGGGACTCCAAGATTCCTGACATTGACTATAGACAAGAAAGTCATAGAGAGTTGGGTTCATTGCAATCAGAACTCAATGGACTCTTGTCTGAAGCAGTGACCAATAGCAGAATGCAGCCAGTAGCTCCTTCTCCTCTGGAAGATGAATTATGCAGCCCTATACAGGGCTTAAGGGCCAATGCTTCCCGACCAAGTGCTAACGATGTATCATCTGCTTGTTGTATGATGTCAGAAAAACTGATGGAAGAGAACTCTGTTGTTGATGAAGAACTAGATGTGAATGACTCAAATATCTATCTTGAATTGGAGGATCTGATTAGCAAACCAGCTGATTGGGTTGGATCTGCAAGTGGACTGGTGGGGCAAACTGGTTGTTTCAAGAGTTTGTCCACACTTCACACGAATACTGCTGCGGCAACAGCAATGATGAGGAGCAATTTATATATAGGCTCTTCAAAATTACCAACTTGA 1506 0.4814 MVLARGGSGEIGGGGRSESVTRVLLNASVGGVARVKSEQVMMSDEESIPSNSGDYCDGEGKVHDDVSSEDSGRKASEVTEDGFMEAVPPVHVKLEEPTGEMDAVDGGVGAGVNGSSSSSSIGLPKPMEGLHEVGPPPFLKKTFEMVEDPETDPIVSWSEGRDSFIVWDSHEFSKILLPKYFKHSNFSSFIRQLNTYGFRKIDSDRWEFANEGFQGGKKHLLKNIRRRSKYNKLQQGGAFTPMKPGLEAEVEKLKKDQNILKVEILKLRQQQENSQVQLINVQERVRSAELKQYQMLFFLTKMARKPTLVQQLIQRVKRKRELDGGEIGKRPRLLGSHCPVGFPRARDSKIPDIDYRQESHRELGSLQSELNGLLSEAVTNSRMQPVAPSPLEDELCSPIQGLRANASRPSANDVSSACCMMSEKLMEENSVVDEELDVNDSNIYLELEDLISKPADWVGSASGLVGQTGCFKSLSTLHTNTAAATAMMRSNLYIGSSKLPT 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1503 501 Coils Coil 250 270 - -
Dere14g1503 501 ProSitePatterns HSF-type DNA-binding domain signature. 177 201 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere14g1503 501 SUPERFAMILY "Winged helix" DNA-binding domain 134 227 IPR036390 -
Dere14g1503 501 Gene3D - 131 228 IPR036388 -
Dere14g1503 501 SMART hsfneu3 134 227 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere14g1503 501 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 124 363 IPR027725 -
Dere14g1503 501 FunFam Heat shock transcription factor 1 131 228 - -
Dere14g1503 501 PRINTS Heat shock factor (HSF) domain signature 138 161 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere14g1503 501 PRINTS Heat shock factor (HSF) domain signature 176 188 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere14g1503 501 PRINTS Heat shock factor (HSF) domain signature 189 201 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere14g1503 501 MobiDBLite consensus disorder prediction 57 79 - -
Dere14g1503 501 Pfam HSF-type DNA-binding 138 227 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere14g1503 501 MobiDBLite consensus disorder prediction 38 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1503 Dere-ChrDere14 16111879 16114195 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1503 124 457 HSF AT2G26150 42.274 1.02e-84 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Dere14g1503 HSF_DNA-bind 3.6e-32 CL0123