Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1502 ATGGAGGAAGCTCAATTGGAAGCTTCAAAACCCTCTGAAGTTCTGATGGGTTTCCCTAGCTACCGTCGATCACACTTAAAGAGTGAAACTTTCCGTACCCTGGTTCGTATCCTATCCCACTGCTGCGACGAATCGCAGCTACCTGGTGCCATTCAAACCCATTCTGCTTCTCCGGAGCTGAAAAATCATGATAATGGCACTGATAGAATGGAGCAAGAAAGCCAGAAAAAGGAGCTTGAGCACTTACAATTCGCTGGTAACGATTTTAAGGATCCCAGGGATCCTGTATTCCGTAAAGAAACACAGGCTCTTGAGAACTTTGAAGGGGATATGATGATTTGTGAAAGTGCAAGTGTTGAGGCCCTGCCTGTGGGAGGATTAGGCGAGCAACAAAATGGAAGCAGTGAAGTTGAGTTGATGGATTACCAAGTAGATTATGTCGAATTTAAAGGATCTGATATTAACACATCTGGAACTGAAAGTGAATTACATATAGAAGGAGAATTTAATCAACATGCCTCTGAAGGCTTTCATGGTGCTTTCAATGCTGACATTTCAACATCCACAAAGGAACAAACATTGGTACCTGTAATTAACACATCGAGTATAGAGCATAATAGACAACAAAAGGACATTGAATTAGTAAAACCAGTTTCTGCTGAAATGGTTTCTCTTCTGACTACTGAAGAGGGTGACTTTGAGAAGGAAGAACTACATGGCCAGATGGTTCATGAAGCAATGCACCTTTCTGTAGATCAGGGTATGAAAAAAAATGAAGCATTGAAGTTGAGTATACAGCATGAGAGACAACAGAAGGAAATGGAATTGGTGAAACCTGATTGTGCTGCAATTGTTTCTCTTCCTACTACTGAAGATGGTGAGTTTGAGAAGGAAGAACAACAAGGCCAAAAAGTTTCTGAAACATTTCACTTTTCTGTAGATCAGAGTATTAATAGTGAAGAAAGAATAAAGCATGAGAGACAACAAAAGGAAATGGAATTGGTGAAACCAGTTTGTGCTGCAATGGTTTCTCTTTCCACTACCAAAGAGGGTGAGTTTGAGAAGGAAGAACAACATGGTCAAAAGGTTCCTGAAGCAATGCACTTATCTGTAGGTCAGGGTTTGAATAGTGAAGCATTAAATGTAAGTGAATATGGTGAAGAGGAGATATCATTACTGGACATTGATATTTTGGAAGCTAAACATGTAATGCAGCATGAGGAAGAGCAACCAGAAAAAATAACTTGTGCAAATGATACAACAATATTTTCCAATAATCTGATTGAGGAAGGTGACGTTGAAGAGGGAGAAATTTCTGGTGACTTTGGAATAGATGACAGTTCATTTGATTGGTCTTCTGCTGATCGTTTGATGATACACCAGAGGAAAGATGAGGCTCAAAAGCCCACAAATATACCAAACAGGGAAAAAGAAGAAAATAATGAATCTACTTCCTTTATGATTCATGCACCTCAAGATGCCTGTATCAGTGGGCAAGCAGAACCATGCACAAGTGATAAAAATGGGTTTCCAGGTGGAGTTGACAAAGGAATCTGTCGGGAAATTATTAATTATGGAGATGTAGTTGAGCATAGTTCTGTGTTAGAGACTGGAAAAAGTGAAAATAGAGGCAGTGGAATTAAAGGGGCCGTGGACTTGCCAGCGGCTTTGGCTTACAACCAAGTCTTGCACAGAGGATTCTTGGAAGAAGAAGCAACTCAAGATAATCAGAACACATCTGCAGTGAAGAAAGCTGCCATCAACTGTAAGAAAAAGCGTGGTCCTGTTACTGAGGAAAAGAAAGCTAAAAAGAAGGAAAAGAAACGAAAGAAGCGAGCAGAAAAGAACAGAAAACTTGGTGTTAAAAGGTTGAAGTTGCTTCCAGTACAGAAACCAAAAACTATTACATATTGCCGCCATTATCTCAAGGGACGGTGCCATGAGCCATGCTGTCATTTTGCCCGTCACTCTTGCATGAAAGGGGATGACTGTCCATTTGATCATCAGCTCTCCAAGTATCCTTGTAGCAATTTTGTGACCAGAGGTTCTTGCAGCAGAGGAGATGCTTGTATGTTTTCACACCAGATGCCAACCAAGCAAGATATTCCTACATCTTCAAATGATAGCAAACCTGAGTTGAAGCCTCAACTCGTATCAGGAAATACAAAACTGAGTAAGCCACCTAACATCGGTGGTAGTAGTGCTTCCCAGCAAAAACGCATCTCTGATATTAAGGCAATTGAATCTCACATCAATTCAGAACATGAGGTGGCAGACACTGCAAAGAAACCACCAACACAGGCACCTAAAGGAATTAGTTTCATCAATGTTTCACAATCATCATCGCTCAACCCTAGTACTCCAAAGCAAGGCAAGGTGACTCCAAACAAGGAAAGTGTTGTTGAAATTGGGACCCTTGCAGACCAAAGTGCATCTGGCACAGCTCTAAACTTGCAGGAGAATCCTAAGAAAACGCCAGTGGTGGCACCTAAGGGAATTAACTTTCTTTCATTTGGCAAAGGTCGCCTTTCCAGTTTCAAAAGTTCTGTCAGCTCCTTGTTAAATAGGGAAAGTGGTATCAAGTTGTCTTCAAAAGATAATTCAGGTTTGCTTGAACAGGCAAGTTCATCTCTGGATAAGGATGATTGCAGCAAAGTTGGTAGTGGGACAAAGCAAAGTGTACTGCAGACTGCGCTGCACTCAAATGAGATTTTAAAGCAAAATCAATCTGTAGCAAAGGGAATGAATTTGGATTTTCCCGGAAAAGCTTCGCTAGAGCATAATAGTAATGATGTTCAATTTAGCTTGACCTCTCATCATGACCAGAGTCTTAGTAAATCAGTGCAAGAGGGAATTAAGGCATATACTTCTCAGACTTCAACTCTGCATCCAGCTTCTCCATTTCTTTCAGCTCAATCTTCAGAACACCAAGCATCTGGACATCGTAAACACATATTTAACTCAGCCCAAAGGGCACTGCTATCAACATTATCATTTGCTGCTGAGCATGAGTCAGATATTAAGCTAAAATGCTCTACTGGTGCATCGGCTATGAGATTAGAGATGAATAAGGATGTCAGAAATAGCAGTTCATAG 3096 0.4079 MEEAQLEASKPSEVLMGFPSYRRSHLKSETFRTLVRILSHCCDESQLPGAIQTHSASPELKNHDNGTDRMEQESQKKELEHLQFAGNDFKDPRDPVFRKETQALENFEGDMMICESASVEALPVGGLGEQQNGSSEVELMDYQVDYVEFKGSDINTSGTESELHIEGEFNQHASEGFHGAFNADISTSTKEQTLVPVINTSSIEHNRQQKDIELVKPVSAEMVSLLTTEEGDFEKEELHGQMVHEAMHLSVDQGMKKNEALKLSIQHERQQKEMELVKPDCAAIVSLPTTEDGEFEKEEQQGQKVSETFHFSVDQSINSEERIKHERQQKEMELVKPVCAAMVSLSTTKEGEFEKEEQHGQKVPEAMHLSVGQGLNSEALNVSEYGEEEISLLDIDILEAKHVMQHEEEQPEKITCANDTTIFSNNLIEEGDVEEGEISGDFGIDDSSFDWSSADRLMIHQRKDEAQKPTNIPNREKEENNESTSFMIHAPQDACISGQAEPCTSDKNGFPGGVDKGICREIINYGDVVEHSSVLETGKSENRGSGIKGAVDLPAALAYNQVLHRGFLEEEATQDNQNTSAVKKAAINCKKKRGPVTEEKKAKKKEKKRKKRAEKNRKLGVKRLKLLPVQKPKTITYCRHYLKGRCHEPCCHFARHSCMKGDDCPFDHQLSKYPCSNFVTRGSCSRGDACMFSHQMPTKQDIPTSSNDSKPELKPQLVSGNTKLSKPPNIGGSSASQQKRISDIKAIESHINSEHEVADTAKKPPTQAPKGISFINVSQSSSLNPSTPKQGKVTPNKESVVEIGTLADQSASGTALNLQENPKKTPVVAPKGINFLSFGKGRLSSFKSSVSSLLNRESGIKLSSKDNSGLLEQASSSLDKDDCSKVGSGTKQSVLQTALHSNEILKQNQSVAKGMNLDFPGKASLEHNSNDVQFSLTSHHDQSLSKSVQEGIKAYTSQTSTLHPASPFLSAQSSEHQASGHRKHIFNSAQRALLSTLSFAAEHESDIKLKCSTGASAMRLEMNKDVRNSSS 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1502 1031 ProSiteProfiles Zinc finger C3H1-type profile. 669 697 IPR000571 GO:0046872
Dere14g1502 1031 MobiDBLite consensus disorder prediction 51 72 - -
Dere14g1502 1031 Coils Coil 596 617 - -
Dere14g1502 1031 ProSiteProfiles Zinc finger C3H1-type profile. 644 668 IPR000571 GO:0046872
Dere14g1502 1031 MobiDBLite consensus disorder prediction 697 739 - -
Dere14g1502 1031 SMART c3hfinal6 672 696 IPR000571 GO:0046872
Dere14g1502 1031 SMART c3hfinal6 645 670 IPR000571 GO:0046872
Dere14g1502 1031 MobiDBLite consensus disorder prediction 603 620 - -
Dere14g1502 1031 Gene3D - 647 709 - -
Dere14g1502 1031 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI 270 1027 IPR045124 GO:0003723|GO:0045892
Dere14g1502 1031 SUPERFAMILY CCCH zinc finger 673 699 IPR036855 GO:0046872
Dere14g1502 1031 MobiDBLite consensus disorder prediction 592 620 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Dere14g1502 None None None