Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1497 ATGCTCCCCATGGACGCTGTCTTCTCCCTCCCCGAAGCTGCCAGAGCTAACTTTCTGCGCTCTAAAATGCAGTCCTCTGGCTGCTCATACATTTGTCTTTGGTCCTATGATCCACTCTTACCCAATCGTTTGCTGTTCTTGGATGGTTTGTACAACGTGAGAATCAACCAACCGAGTTCTTCTTTGGGGAGTATAGCTCAAAGGCCTTTTAACCAATTTAGGGGTTTAGTATTTGATGTCAATGATAATGATCGTATTCCAGGACTAGCTTTCAAGAACCGCAATGCTTACCTGGAGCTCCAGCAACCTGATCTTCTAAGGTTGGCATGGACACAAGTACAGACACAATTTTATCAGGAGGCAAGGATTAAGACTGCAGTCTTCATGGGGTGCAACAATGGGGAAATTGAGCTCGGATTCTCAACCATGTCCCAAGCTGATATTCAAACAGCACTTAACAATTGGTTCCCAGATGAATTTTCCAGATCACAACCATCCCATCAGCAGCCAAACATTGATCAGAATCAGAACCCACCTTCATCATCTTCATCTTCCTTGAGATCACTCTCATTGTCCACAGGAAGCCCTGAATATTCATCCCTCGTATTCAATATTCCTGGCTCTTCTTCTGACTTTCCTGCAGAATCCCTTGCAGCTTCTACCCCTCACCAGCAAGCCATCCAAGCACTAGCTCATGCCTCACAGAACCCATTTCCCACACCAGAGAGTGAACATGATACTATAATGCGAGAAATCCTTCAACTCATATCTAATTCTTCTTCTTCTTCCACCTCTCTTCGTCATCAACCCCACCAGGATTTGCCTTATGTGGTTCATCCTGAGGCCAGTGCTTTCAAACGGTATAGCCCCACTATCACATCCCAAATGGGGTCAGATTTGCGCAGGCAAGGTATCTTTAAGAGGTCATTGACATTCTTTAGAAACTTGAATTTCATGAGAATGAGAGAACGTGTTCAAACAACTCGCCCCACTAGTACTCAGCTTCATCACATGATATCAGAGAGAAGAAGGCGTGAGAAGCTCAATGAGAATTTTCAGGCTCTAAGATCACTGCTTCCTCCAGGAACTAAGAAAGACAAATCATCCATACTTACAACAGCAAAGGAGACACTCAGCTCATTAATGGCGGAGATTGAAAAGGTTAAAGAAAGAAACAAAAAGTTGGAGGCATCATCATCTTCAATGGCGACTGCTCCTCCAGCCCAAGAAGCCAGTGATCATGAATTTCCAAATGAAAGGTTGAGTGTGAGAGTTTCACATGAACCAGAATCAAGCTCGTCAGAAGAGAGAATGGTGGACTTGGAAGTGACAGTGAGATCAGGACAAAGTTCTCAAGTTGATATCTTGATTCGATTATTGGAGTTCCTTAAACAAGATCAAAACTTGAGCTTGATTTCTATGGAAGCTAACACCCATTTTGCACACGCCACTTCCTTCAACCGAATAACCTTAAGACTGAGAATTGAGGGAAGTGAATGGGACGAGTCTGCCTTCCAGGAAGCAGTGAGAAGGGTGGTTGCTGACCTGGCACAGTGA 1557 0.4432 MLPMDAVFSLPEAARANFLRSKMQSSGCSYICLWSYDPLLPNRLLFLDGLYNVRINQPSSSLGSIAQRPFNQFRGLVFDVNDNDRIPGLAFKNRNAYLELQQPDLLRLAWTQVQTQFYQEARIKTAVFMGCNNGEIELGFSTMSQADIQTALNNWFPDEFSRSQPSHQQPNIDQNQNPPSSSSSSLRSLSLSTGSPEYSSLVFNIPGSSSDFPAESLAASTPHQQAIQALAHASQNPFPTPESEHDTIMREILQLISNSSSSSTSLRHQPHQDLPYVVHPEASAFKRYSPTITSQMGSDLRRQGIFKRSLTFFRNLNFMRMRERVQTTRPTSTQLHHMISERRRREKLNENFQALRSLLPPGTKKDKSSILTTAKETLSSLMAEIEKVKERNKKLEASSSSMATAPPAQEASDHEFPNERLSVRVSHEPESSSSEERMVDLEVTVRSGQSSQVDILIRLLEFLKQDQNLSLISMEANTHFAHATSFNRITLRLRIEGSEWDESAFQEAVRRVVADLAQ 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1497 518 MobiDBLite consensus disorder prediction 392 437 - -
Dere14g1497 518 SMART finulus 338 387 IPR011598 GO:0046983
Dere14g1497 518 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 111 515 IPR044658 -
Dere14g1497 518 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 330 399 IPR036638 GO:0046983
Dere14g1497 518 Coils Coil 371 398 - -
Dere14g1497 518 Gene3D - 331 404 IPR036638 GO:0046983
Dere14g1497 518 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 332 381 IPR011598 GO:0046983
Dere14g1497 518 MobiDBLite consensus disorder prediction 157 192 - -
Dere14g1497 518 Pfam Helix-loop-helix DNA-binding domain 336 381 IPR011598 GO:0046983
Dere14g1497 518 MobiDBLite consensus disorder prediction 413 437 - -
Dere14g1497 518 CDD bHLH_AtbHLH_like 337 387 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1497 Dere-ChrDere14 16031238 16035434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1497 4 518 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G56960 41.530 5.64e-99 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dere14g1497 HLH 2.2e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g1497 14 16031238 16035434 Dere14g1497 14 16031238 16035434 ECH