Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere14g1485 | ATGATACCAACTTATCCTTACTCTCTTTCTTCTTCGTCTTCTTCTGCTCCTTCTCCTATGCCTATAGATCTTAATGTTGAAGATGAAAACCATGAGCTAATTTTTAGCCCAACCCACCAACCCTCTTCTTCATCCTCTTCTCTATCGTATCCTATTCTCTTCAACCCATCTCAGGATCATGCAGGATCTTCCTACTGGGAGCCCAAGCACTTACCAAGTGATGAGGAGGCTGGGAAGATTATTACTTCAAGTGGATCATGGGATGATCCAGAAGAAAAGGGTATTGAGAGAAAGAGGGGCTGCAAACTGAAAGTTTGGAAGAGAGGATCAGAGAGAGAGGATCAAAATCATCAAGGAGAAGATACTGATTCGGTGAAGTGGATGCCTTCAAAGATGAGAATGATGAAGAAGATGATGGCTTCAGATCAAAAAGTTTCTGACATTAATATACCACTTGCAGACACCCCTAGGCAGAAGAAGTTTGAAGATCAGAATCAGAAGCAAGAACCATTACTATTGTCTCCTCATAGCAGCAGCAGCAACAGTTCTTCAACCCACAGTAATCATAATGATAATAATAGTAATATCACTGTTAGGGTTTGTGCTGATTGCCACACCACCAAGACCCCTCTATGGAGAAGTGGACCAAGAGGGCCAAAGTCACTTTGCAACGCCTGTGGAATTCGACAAAGGAAGGCAAGGCGTGCCATGGCTGCAGCAGCTGCAGCTGCAGCAGACGGCTCGGCTCTCGCTGTTCAGAAATCTCCTGTGAAGGGAAATTACAAGTTTCACAGCAGAGAGAAGTCAAAAATGCAGTGTGATGATCAGACTCAGCTTAAGAAGAAGCGCAAGCTTGATGATCAAATTCAAGCCAACCCAACAACATCTAGAGGTAGAATAAAGCAGTTTGGTTTTGAGGATTTCACAGTAAGCAGCTTGAGTAAGAACCTGCAAGCTGCATCACAAGTTTTCCCTCTGGATGAGAAGGAGGCAGCCATTCTTCTCATGGCTTTATCTCACAATGGCCTAGTTCATGGATGA | 1041 | 0.439 | MIPTYPYSLSSSSSSAPSPMPIDLNVEDENHELIFSPTHQPSSSSSSLSYPILFNPSQDHAGSSYWEPKHLPSDEEAGKIITSSGSWDDPEEKGIERKRGCKLKVWKRGSEREDQNHQGEDTDSVKWMPSKMRMMKKMMASDQKVSDINIPLADTPRQKKFEDQNQKQEPLLLSPHSSSSNSSSTHSNHNDNNSNITVRVCADCHTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAAAAAAAADGSALAVQKSPVKGNYKFHSREKSKMQCDDQTQLKKKRKLDDQIQANPTTSRGRIKQFGFEDFTVSSLSKNLQAASQVFPLDEKEAAILLMALSHNGLVHG | 346 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere14g1485 | 346 | ProSitePatterns | GATA-type zinc finger domain. | 201 | 226 | IPR000679 | GO:0006355|GO:0043565 | |
| Dere14g1485 | 346 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 197 | 235 | - | - | |
| Dere14g1485 | 346 | MobiDBLite | consensus disorder prediction | 167 | 194 | - | - | |
| Dere14g1485 | 346 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Dere14g1485 | 346 | FunFam | GATA transcription factor 21 | 195 | 288 | - | - | |
| Dere14g1485 | 346 | MobiDBLite | consensus disorder prediction | 155 | 194 | - | - | |
| Dere14g1485 | 346 | Pfam | GATA zinc finger | 201 | 234 | IPR000679 | GO:0006355|GO:0043565 | |
| Dere14g1485 | 346 | MobiDBLite | consensus disorder prediction | 35 | 62 | - | - | |
| Dere14g1485 | 346 | MobiDBLite | consensus disorder prediction | 1 | 95 | - | - | |
| Dere14g1485 | 346 | PANTHER | GATA TRANSCRIPTION FACTOR 22-RELATED | 1 | 345 | - | - | |
| Dere14g1485 | 346 | MobiDBLite | consensus disorder prediction | 108 | 129 | - | - | |
| Dere14g1485 | 346 | CDD | ZnF_GATA | 200 | 228 | IPR000679 | GO:0006355|GO:0043565 | |
| Dere14g1485 | 346 | SMART | GATA_3 | 195 | 247 | IPR000679 | GO:0006355|GO:0043565 | |
| Dere14g1485 | 346 | ProSiteProfiles | GATA-type zinc finger domain profile. | 199 | 231 | IPR000679 | GO:0006355|GO:0043565 | |
| Dere14g1485 | 346 | Gene3D | - | 191 | 287 | IPR013088 | GO:0006355|GO:0008270 | |
| Dere14g1485 | 346 | MobiDBLite | consensus disorder prediction | 108 | 127 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dere14g1485 | Dere-ChrDere14 | 15811049 | 15812765 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dere14g1485 | 122 | 346 | C2C2-Gata Transcription Factor Family | AT4G26150 | 38.034 | 1.59e-32 | 122 |
Transcription factors information