Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1479 ATGACAAATCATATGATTGGGTTTCTCTTAAGCAGCTTCTTTGTGCCCGCTGCGTTCGCCGGTAACTTAAACCAGGACTTTCAAATCACGTGGGGCGACGGCCGTGCCCGAATCCTCGACGCCGGCAACCTCCTCACCCTCTCCCTCGACAAAAGCTCCGGCTCCGGCTTCCGCTCCCGCAACGAATACCTCTTCGCCAAGATCGACATACAGATCAAACTTGTCCCCGGCAACTCCGCCGGCACCGTCACTGCTTATTACCTAACTTCTCAGGGATCAGCTCATGACGAAATAGATTTTGAATTTCTGGGTAACCTAAGTGGTGACCCATATATTCTTCATACCAACTTATTCACACAAGGAAAAGGCAATCGAGAGCAGCAATTTTACTTGTGGTTCGACCCCACCAAAGACTTCCACACTTATTCTATTCTTTGGAATCCTGAAACCATCATATTCTCTGTGGATGGGACACCAATAAGAGAGTTCAAGAACTTAGAATCAAGGGGCATTCCATTTCCAAAGAACCAAGCCATGAGAATATACTCAAGCCTCTGGGACGCAGATAATTGGGCCACAAGAGGAGGTCTTGTGAAGACAGATTGGAGCCAAGCTCCATTCACTGCCTCATTCAGGAACTTCAATGCCCAGGCTTGTGTTTCTTCTTCTTCATCATCTTCTTCCTCCTGCAACAGTAATGGTGGTTCATCAGACCAGTCATGGCTGAAACAGGCGCTGGACGCAACGGGGCAAGCCAAAATCAAATGGGTGCAGAAAAACTACATGGTTTATAACTATTGCACTGATACCAAGCGATTCCCTCAAGGCCTGCCTCCTGAATGCTCACTCTCCTGA 855 0.4807 MTNHMIGFLLSSFFVPAAFAGNLNQDFQITWGDGRARILDAGNLLTLSLDKSSGSGFRSRNEYLFAKIDIQIKLVPGNSAGTVTAYYLTSQGSAHDEIDFEFLGNLSGDPYILHTNLFTQGKGNREQQFYLWFDPTKDFHTYSILWNPETIIFSVDGTPIREFKNLESRGIPFPKNQAMRIYSSLWDADNWATRGGLVKTDWSQAPFTASFRNFNAQACVSSSSSSSSSCNSNGGSSDQSWLKQALDATGQAKIKWVQKNYMVYNYCTDTKRFPQGLPPECSLS 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1479 284 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 17 211 IPR000757 GO:0004553|GO:0005975
Dere14g1479 284 Gene3D - 14 284 - -
Dere14g1479 284 ProSitePatterns Glycosyl hydrolases family 16 active sites. 97 107 IPR008263 GO:0004553|GO:0005975
Dere14g1479 284 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 283 IPR013320 -
Dere14g1479 284 PIRSF EndGlu_transf 2 284 IPR016455 GO:0010411|GO:0016762|GO:0042546
Dere14g1479 284 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 237 281 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Dere14g1479 284 FunFam Xyloglucan endotransglucosylase/hydrolase 10 283 - -
Dere14g1479 284 CDD GH16_XET 20 281 IPR016455 GO:0010411|GO:0016762|GO:0042546
Dere14g1479 284 Pfam Glycosyl hydrolases family 16 24 203 IPR000757 GO:0004553|GO:0005975
Dere14g1479 284 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 22 281 IPR044791 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1479 Dere-ChrDere14 15775310 15777509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1479 9 281 Glycoside Hydrolase AT4G25810 72.161 1.23e-148 416