LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere14g1478	ATGGTTGATGAACCTTCAGCGAGCTTCCTCTCCTACCCCAGAATGCCTCGCCGAGTCTTCGAAGGTTTACTCCTCATTTCTTGCATTTCTATACATAGTCTATCACTCTTTTTCATAGAGAAATCAGTGGGATCTCCTTCATCCTCTCAAGATATTCAGGCATCTTCATCTGGATCCAGTTCCGAAGGACTGTTCTTTTTCCTTGGAGGGATAGTAGTGCTCATCATATTGCTGATTCTTGTATTTGTGTTTCGGAAGCATATTAAACCAGCAAAACTGATGAATATGATAGCTACAACTAAACAGCGGCCAGGATCCATGGAGCTCTTCAGTGGGAACCTTCGGACAATTAGCTACTTTGACTACCAGACATTGAAGAAGGCAACCATGAATTTTCATTCTCATAATCTTCTTGGAAGTGGTGGATTTGGGCCTGTCTATCGGGGAAAGTTGGCAGATGGAAGGCTAATTGCTGTTAAAAAACTGTCTCTTGACAAATCCAAACAAGGAGAAAAAGAATTTCTAGCAGAGGTGAGAATGATCACAAGTATTCAACACAAAAATCTGGTTCGCCTTATTGGATGCTGCACAGATGGGCCTCAAAGGATCCTTGTGTATGAATACATGAAGAACAGAAGTTTGGACCTCTTAATATATGGAAACAGTGATCAATTTCTGAATTGGAGCATTAGGCTCCAAATTATTGTTGGAATAGCACGTGGATTGCAATATTTGCATGAAGATTCACATCTAAGAATTGTTCACCGAGATATCAAAGCAAGCAATATTCTTCTTAATGAAAAGTTTCAGCCAAGGATTGGAGACTTTGGGCTTGCTAGATTCTTCCCTGAAGACCAAGATTACCTTAGCACTCAGTTTGCTGGAACATTAGGTTATACAGCTCCTGAATATGCTATTAGAGGAGAATTGTCAGAAAAGGCAGATATCTATAGTTTTGGAGTCCTTGTACTTGAAATCATAAGTTGCAGGAAAAATACCGACCTTACTTTACCATCAGAAATGCAGTATCTTCCTGAATATGCATGGAGGCTTTATGAGAAGTCAAGATGGATGGATCTTGTTGACCCGAAATTGCGGCAACATGGATTTGTAGAAAAGGACGTTATGCAAGCAATCCATGTGGCCTTCTTATGTCTTCAGACTCAAGCAAATTTAAGACCTCCCATGTCAGAGATTGTAGCATTATTGACATTCAAAATTGACATGGTTACAACGCCGATGAAACCAGCCTTCCTTGACCGAAGGCATAAAAAGGATGATGAGAACCATTCTTGGGAAACCATATCTGAGGCATTCCCTTCACCCATGGCTAGTGATTCTACATCCGTAGCTAAACCACCAAACTAA	1368	0.4057	MVDEPSASFLSYPRMPRRVFEGLLLISCISIHSLSLFFIEKSVGSPSSSQDIQASSSGSSSEGLFFFLGGIVVLIILLILVFVFRKHIKPAKLMNMIATTKQRPGSMELFSGNLRTISYFDYQTLKKATMNFHSHNLLGSGGFGPVYRGKLADGRLIAVKKLSLDKSKQGEKEFLAEVRMITSIQHKNLVRLIGCCTDGPQRILVYEYMKNRSLDLLIYGNSDQFLNWSIRLQIIVGIARGLQYLHEDSHLRIVHRDIKASNILLNEKFQPRIGDFGLARFFPEDQDYLSTQFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWRLYEKSRWMDLVDPKLRQHGFVEKDVMQAIHVAFLCLQTQANLRPPMSEIVALLTFKIDMVTTPMKPAFLDRRHKKDDENHSWETISEAFPSPMASDSTSVAKPPN	455

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere14g1478	455	MobiDBLite	consensus disorder prediction	421	455	-	-
	Dere14g1478	455	SUPERFAMILY	Protein kinase-like (PK-like)	109	406	IPR011009	-
	Dere14g1478	455	MobiDBLite	consensus disorder prediction	434	455	-	-
	Dere14g1478	455	PANTHER	CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3	63	431	-	-
	Dere14g1478	455	FunFam	Putative LRR receptor-like serine/threonine-protein kinase isoform A	209	413	-	-
	Dere14g1478	455	SMART	serkin_6	132	405	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dere14g1478	455	CDD	STKc_IRAK	138	404	-	-
	Dere14g1478	455	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	253	265	IPR008271	GO:0004672\|GO:0006468
	Dere14g1478	455	Gene3D	Phosphorylase Kinase; domain 1	92	208	-	-
	Dere14g1478	455	Gene3D	Transferase(Phosphotransferase) domain 1	209	412	-	-
	Dere14g1478	455	Pfam	Protein tyrosine and serine/threonine kinase	135	402	IPR001245	GO:0004672\|GO:0006468
	Dere14g1478	455	ProSiteProfiles	Protein kinase domain profile.	132	405	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dere14g1478	455	FunFam	Cysteine-rich receptor-like protein kinase 10	96	208	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere14g1478	Dere-ChrDere14	15757606	15762415	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere14g1478	70	453	Receptor kinase-like Gene Family	AT1G56120	42.674	1.67e-101	321

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Dere14g1478		PK_Tyr_Ser-Thr	8.5e-47	CL0016